CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Quercus robur-QTL_3PxA4_2008_Leaf_morph3  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG12F
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Magnification
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 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
AFLP
gSSR
QTL
RAPD
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: QTL [ View Map Type Info ]
Map Set Name: Quercus robur - QTL_3PxA4_2008_Leaf_morphology3 [ View Map Set Info ]
Map Name: LG12F
Map Start: 0.00 cM
Map Stop: 49.50 cM
Features by Type:
1 RAPD
2 QTL
1 gSSR
2 AFLP
6 Total

Map Features

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Items 1 to 6 of 6.
Quercus robur - QTL_3PxA4_2008_Leaf_morphology3 - LG12F
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
A10-1000/3 RAPD 0.00 Quercus robur - QTL_3PxA4_2008_Hypoxie - LG12F A10-1000/3 RAPD 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG12F A10-1000/3 RAPD 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph1 - LG12F A10-1000/3 RAPD 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG12F A10-1000/3 RAPD 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph2 - LG12F A10-1000/3 RAPD 0.00 (cM) Automated name-based View Maps
E-AAC/M-CTT-328/5 AFLP 16.30 Quercus robur - QTL_3PxA4_2008_Hypoxie - LG12F E-AAC/M-CTT-328/5 AFLP 16.30 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph1 - LG12F E-AAC/M-CTT-328/5 AFLP 16.30 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG12F E-AAC/M-CTT-328/5 AFLP 16.30 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG12F E-AAC/M-CTT-328/5 AFLP 16.30 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph2 - LG12F E-AAC/M-CTT-328/5 AFLP 16.30 (cM) Automated name-based View Maps
P-CAG/M-GCA-122 AFLP 49.50 Quercus robur - QTL_3PxA4_2008_CO2_response - LG12F P-CAG/M-GCA-122 AFLP 49.50 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph2 - LG12F P-CAG/M-GCA-122 AFLP 48.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph1 - LG12F P-CAG/M-GCA-122 AFLP 48.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG12F P-CAG/M-GCA-122 AFLP 49.50 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG12F P-CAG/M-GCA-122 AFLP 49.50 (cM) Automated name-based View Maps
LL QTL 35.00 Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG5M LL QTL 92.30 - 105.10 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG5F LL QTL 35.70 - 63.70 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG2F LL QTL 0.00 - 42.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG6M LL QTL 25.90 - 63.33 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG3F LL QTL 11.20 - 37.80 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG1F LL QTL 28.70 - 33.10 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG5F LL QTL 20.70 - 40.70 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG10F LL QTL 36.00 - 83.50 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG11F LL QTL 0.00 - 42.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG6M LL QTL 46.80 - 63.33 (cM) Automated name-based View Maps
HRf QTL 0.00 - 46.00 Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG8M HRf QTL 20.00 - 80.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph2 - LG1M HRf QTL 17.90 - 43.70 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG6M HRf QTL 7.00 - 57.90 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG5M HRf QTL 46.00 - 114.60 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG1F HRf QTL 11.00 - 59.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph2 - LG12F HRf QTL 5.70 - 29.50 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG1M HRf QTL 24.00 - 44.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG6F HRf QTL 9.00 - 79.00 (cM) Automated name-based View Maps
ZQR112 gSSR 33.60 Quercus robur - QTL_3PxA4_2008_Hypoxie - LG12F ZQR112 gSSR 33.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG12M ZQR112 gSSR 18.82 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG12F ZQR112 gSSR 33.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG12F ZQR112 gSSR 43.79 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG12 ZQR112 gSSR 38.08 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG12F ZQR112 gSSR 45.07 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG12F ZQR112 gSSR 33.60 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph2 - LG12F ZQR112 gSSR 32.40 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG12F ZQR112 gSSR 25.70 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG12F ZQR112 gSSR 33.60 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG12F ZQR112 gSSR 25.70 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG12F ZQR112 gSSR 5.98 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG12F ZQR112 gSSR 18.79 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG12F ZQR112 gSSR 18.88 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG12F ZQR112 gSSR 26.19 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG12F ZQR112 gSSR 33.60 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG12F ZQR112 gSSR 33.60 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph1 - LG12F ZQR112 gSSR 32.40 (cM) Automated name-based View Maps

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