CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus robur-QTL_3PxA4_2008_Leaf_morph3  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG4M
Start
Stop
Magnification
Flipped



 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
AFLP
gSSR
QTL
RAPD
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: QTL [ View Map Type Info ]
Map Set Name: Quercus robur - QTL_3PxA4_2008_Leaf_morphology3 [ View Map Set Info ]
Map Name: LG4M
Map Start: 0.00 cM
Map Stop: 84.20 cM
Features by Type:
1 RAPD
2 QTL
1 gSSR
4 AFLP
8 Total

Map Features

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Items 1 to 8 of 8.
Quercus robur - QTL_3PxA4_2008_Leaf_morphology3 - LG4M
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
E-AAC/M-CTT-120/3 AFLP 0.00 Quercus robur - QTL_3PxA4_2008_Debourrement - LG4M E-AAC/M-CTT-120/3 AFLP 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG4M E-AAC/M-CTT-120/3 AFLP 0.00 (cM) Automated name-based View Maps
E-AAG/M-CTA-150/5 AFLP 8.70 Quercus robur - QTL_3PxA4_2008_CO2_response - LG4M E-AAG/M-CTA-150/5 AFLP 8.70 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG4M E-AAG/M-CTA-150/5 AFLP 8.70 (cM) Automated name-based View Maps
P-CCA/M-CAA-79 AFLP 21.30 Quercus robur - QTL_3PxA4_2008_CO2_response - LG4M P-CCA/M-CAA-79 AFLP 21.30 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG4M P-CCA/M-CAA-79 AFLP 21.20 (cM) Automated name-based View Maps
E-AAC/M-CAA-543/4 AFLP 72.90 Quercus robur - QTL_3PxA4_2008_Debourrement - LG4M E-AAC/M-CAA-543/4 AFLP 72.80 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG4M E-AAC/M-CAA-543/4 AFLP 72.90 (cM) Automated name-based View Maps
B20/1800 RAPD 84.20 Quercus robur - QTL_3PxA4_2008_Debourrement - LG4M B20/1800 RAPD 84.20 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG4M B20/1800 RAPD 84.20 (cM) Automated name-based View Maps
BS QTL 51.00 - 84.20 Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG9M BS QTL 0.00 - 40.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG4F BS QTL 11.00 - 91.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG3M BS QTL 0.00 - 18.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG2F BS QTL 0.00 - 48.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG8M BS QTL 38.00 - 94.80 (cM) Automated name-based View Maps
NV QTL 0.00 - 40.00 Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG5F NV QTL 21.00 - 43.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG5F NV QTL 36.60 - 60.60 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG3M NV QTL 14.00 - 42.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG3F NV QTL 20.10 - 46.10 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG8F NV QTL 5.60 - 46.60 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG3F NV QTL 0.00 - 18.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG9M NV QTL 53.10 - 58.90 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG5F NV QTL 11.60 - 49.60 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG9M NV QTL 0.00 - 37.60 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph2 - LG3F NV QTL 0.10 - 31.50 (cM) Automated name-based View Maps
CQM4 gSSR 57.30 Quercus petraea - Genetic_Qs28xQs21_2009 - LG4Mb CQM4 gSSR 13.80 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG4F CQM4 gSSR 55.84 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG4M CQM4 gSSR 57.30 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG4M CQM4 gSSR 57.30 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG4M CQM4 gSSR 57.30 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG4F CQM4 gSSR 62.05 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG4F CQM4 gSSR 71.20 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG4M CQM4 gSSR 69.43 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG4F CQM4 gSSR 71.20 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG4F CQM4 gSSR 71.20 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG4M CQM4 gSSR 57.30 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG4Mb CQM4 gSSR 15.48 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG4F CQM4 gSSR 89.10 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG4M CQM4 gSSR 41.76 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG4M CQM4 gSSR 57.20 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG4F CQM4 gSSR 71.20 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG4F CQM4 gSSR 71.20 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG4F CQM4 gSSR 71.20 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG4F CQM4 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG4F CQM4 gSSR 71.20 (cM) Automated name-based View Maps

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