CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus robur-QTL_3PxA4_2008_CO2_response  (Reference Set)
Min. Correspondence
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Maps LG7M
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 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
AFLP
gSSR
QTL
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
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Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: QTL [ View Map Type Info ]
Map Set Name: Quercus robur - QTL_3PxA4_2008_CO2_response [ View Map Set Info ]
Map Name: LG7M
Map Start: 0.00 cM
Map Stop: 114.60 cM
Features by Type:
4 QTL
2 gSSR
2 AFLP
8 Total

Map Features

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Items 1 to 8 of 8.
Quercus robur - QTL_3PxA4_2008_CO2_response - LG7M
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
E-AAC/M-CAT-352/1* AFLP 29.40 Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG7M E-AAC/M-CAT-352/1* AFLP 29.40 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG7M E-AAC/M-CAT-352/1* AFLP 29.40 (cM) Automated name-based View Maps
E-AAG/M-CTA-224/2* AFLP 43.60 Quercus robur - QTL_3PxA4_2008_Hypoxie - LG7M E-AAG/M-CTA-224/2* AFLP 43.60 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG7M E-AAG/M-CTA-224/2* AFLP 43.60 (cM) Automated name-based View Maps
SPCa QTL 49.39 - 114.60 Quercus robur - QTL_3PxA4_2008_CO2_response - LG5M SPCa QTL 49.39 - 114.60 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG1M SPCa QTL 20.72 - 49.68 (cM) Automated name-based View Maps
RQa QTL 0.00 - 18.79 Quercus robur - QTL_3PxA4_2008_CO2_response - LG11M RQa QTL 27.14 - 87.10 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG1F RQa QTL 0.00 - 44.81 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG6M RQa QTL 3.90 - 43.50 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG8M RQa QTL 72.01 - 94.80 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG2M RQa QTL 0.00 - 18.79 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG8M RQa QTL 25.43 - 38.17 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG11M RQa QTL 25.43 - 38.17 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG11F RQa QTL 0.00 - 54.77 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG2M RQa QTL 61.55 - 105.45 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG11F RQa QTL 0.00 - 44.81 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG11M RQa QTL 66.26 - 87.10 (cM) Automated name-based View Maps
SCm QTL 20.16 - 87.10 Quercus robur - QTL_3PxA4_2008_CO2_response - LG9M SCm QTL 10.87 - 63.20 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG12F SCm QTL 0.00 - 30.46 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG11M SCm QTL 20.16 - 87.10 (cM) Automated name-based View Maps
SCm QTL 20.16 - 87.10 Quercus robur - QTL_3PxA4_2008_CO2_response - LG11M SCm QTL 20.16 - 87.10 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG9M SCm QTL 10.87 - 63.20 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG12F SCm QTL 0.00 - 30.46 (cM) Automated name-based View Maps
ZQR108 gSSR 21.50 Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG7M ZQR108 gSSR 21.50 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG7M ZQR108 gSSR 21.50 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG7M ZQR108 gSSR 39.68 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG7F ZQR108 gSSR 26.65 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG7M ZQR108 gSSR 21.50 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG7M ZQR108 gSSR 52.32 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG7F ZQR108 gSSR 36.94 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG7M ZQR108 gSSR 25.58 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG7M ZQR108 gSSR 21.50 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG7F ZQR108 gSSR 64.40 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG7M ZQR108 gSSR 20.61 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG7M ZQR108 gSSR 21.50 (cM) Automated name-based View Maps
ZQP9 gSSR 0.00 Quercus robur - QTL_3PxA4_2008_Debourrement - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG7M ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG5F ZQP9 gSSR 42.98 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG5M ZQP9 gSSR 29.14 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG7F ZQP9 gSSR 103.46 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG7F ZQP9 gSSR 11.04 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG7M ZQP9 gSSR 37.71 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Croissance - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG7M ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG7F ZQP9 gSSR 84.88 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG7M ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG7F ZQP9 gSSR 36.05 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG7M ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG7M ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG7F ZQP9 gSSR 84.88 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG7M ZQP9 gSSR 65.80 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG7M ZQP9 gSSR 3.52 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG7M ZQP9 gSSR 11.85 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG7M ZQP9 gSSR 89.41 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG7M ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG7M ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps

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