CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



Save link

* Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link.



General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Quercus petraea-Genetic_Qs29_2015  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG9
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus petraea - Genetic_Qs29_2015 [ View Map Set Info ]
Map Name: LG9
Map Start: 0.00 cM
Map Stop: 57.14 cM
Features by Type:
63 SNP
63 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 63.       of 3 | Next
Quercus petraea - Genetic_Qs29_2015 - LG9
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
s_1B95KZ_324 SNP 0.00 Quercus robur - Genetic_A4_2015 - LG9 s_1B95KZ_324 SNP 2.16 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1B95KZ_324 SNP 2.20 (cM) Automated name-based View Maps
v_7237_179 SNP 0.00 Quercus petraea - Genetic_Qs28m_2015 - LG9 v_7237_179 SNP 2.81 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG9 v_7237_179 SNP 5.62 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG9 v_7237_179 SNP 2.63 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 v_7237_179 SNP 3.70 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG9 v_7237_179 SNP 6.48 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG9 v_7237_179 SNP 2.57 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG9 v_7237_179 SNP 4.94 (cM) Automated name-based View Maps
s_1AGPE8_928 SNP 0.00 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1AGPE8_928 SNP 5.20 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG9 s_1AGPE8_928 SNP 4.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG9 s_1AGPE8_928 SNP 6.18 (cM) Automated name-based View Maps
v_12804_498 SNP 0.00 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 v_12804_498 SNP 5.50 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG9 v_12804_498 SNP 7.72 (cM) Automated name-based View Maps
s_1AZEER_297 SNP 0.00 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1AZEER_297 SNP 5.50 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG9 s_1AZEER_297 SNP 6.18 (cM) Automated name-based View Maps
s_1A2RBI_433 SNP 0.00 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1A2RBI_433 SNP 5.50 (cM) Automated name-based View Maps
s_1A245_1015 SNP 0.88 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1A245_1015 SNP 7.50 (cM) Automated name-based View Maps
s_1CU1ID_635 SNP 1.75 Quercus robur - Genetic_A4_2015 - LG9 s_1CU1ID_635 SNP 9.88 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1CU1ID_635 SNP 8.40 (cM) Automated name-based View Maps
s_1CY21S_1635 SNP 1.75 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1CY21S_1635 SNP 8.90 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG9 s_1CY21S_1635 SNP 6.86 (cM) Automated name-based View Maps
v_5944_190 SNP 1.75 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 v_5944_190 SNP 9.20 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG9 v_5944_190 SNP 10.80 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG9 v_5944_190 SNP 10.68 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG9 v_5944_190 SNP 12.36 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG9 v_5944_190 SNP 7.15 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG9 v_5944_190 SNP 9.65 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG9 v_5944_190 SNP 6.57 (cM) Automated name-based View Maps
s_1BM0XO_360 SNP 2.63 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1BM0XO_360 SNP 9.30 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG9 s_1BM0XO_360 SNP 10.80 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG9 s_1BM0XO_360 SNP 7.15 (cM) Automated name-based View Maps
s_1BOL3D_361 SNP 2.63 Quercus petraea - Genetic_Qs28m_2015 - LG9 s_1BOL3D_361 SNP 11.24 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1BOL3D_361 SNP 9.80 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG9 s_1BOL3D_361 SNP 7.72 (cM) Automated name-based View Maps
s_1A6ZXV_691 SNP 4.39 Quercus petraea - Genetic_Qs28m_2015 - LG9 s_1A6ZXV_691 SNP 12.36 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1A6ZXV_691 SNP 11.00 (cM) Automated name-based View Maps
s_1A1LLC_816 SNP 4.39 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1A1LLC_816 SNP 11.10 (cM) Automated name-based View Maps
s_1A4VJ7_329 SNP 5.26 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1A4VJ7_329 SNP 11.90 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG9 s_1A4VJ7_329 SNP 9.15 (cM) Automated name-based View Maps
s_1AL23I_976 SNP 5.26 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1AL23I_976 SNP 11.90 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG9 s_1AL23I_976 SNP 12.66 (cM) Automated name-based View Maps
s_1AFQD5_1222 SNP 5.26 Quercus petraea - Genetic_Qs28f_2015 - LG9 s_1AFQD5_1222 SNP 10.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG9 s_1AFQD5_1222 SNP 14.05 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG9 s_1AFQD5_1222 SNP 16.30 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG9 s_1AFQD5_1222 SNP 13.58 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1AFQD5_1222 SNP 12.60 (cM) Automated name-based View Maps
s_1AH0SM_715 SNP 5.26 Quercus petraea - Genetic_Qs28m_2015 - LG9 s_1AH0SM_715 SNP 14.61 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1AH0SM_715 SNP 12.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG9 s_1AH0SM_715 SNP 16.30 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG9 s_1AH0SM_715 SNP 13.89 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG9 s_1AH0SM_715 SNP 10.00 (cM) Automated name-based View Maps
s_1BNXFB_1099 SNP 5.26 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1BNXFB_1099 SNP 12.60 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG9 s_1BNXFB_1099 SNP 10.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG9 s_1BNXFB_1099 SNP 16.30 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG9 s_1BNXFB_1099 SNP 14.05 (cM) Automated name-based View Maps
s_1AOIKO_756 SNP 7.02 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1AOIKO_756 SNP 13.70 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG9 s_1AOIKO_756 SNP 15.17 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG9 s_1AOIKO_756 SNP 16.36 (cM) Automated name-based View Maps
s_1A98EF_77 SNP 7.02 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1A98EF_77 SNP 13.70 (cM) Automated name-based View Maps
s_1A3QQ_692 SNP 8.77 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1A3QQ_692 SNP 15.50 (cM) Automated name-based View Maps
v_10305_387 SNP 16.74 Quercus robur - Genetic_x3P_2015 - LG9 v_10305_387 SNP 19.76 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG9 v_10305_387 SNP 18.31 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG9 v_10305_387 SNP 20.80 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 v_10305_387 SNP 19.30 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG9 v_10305_387 SNP 16.29 (cM) Automated name-based View Maps
s_1A9M2S_762 SNP 18.49 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1A9M2S_762 SNP 21.10 (cM) Automated name-based View Maps
s_1A3HKI_514 SNP 19.37 Quercus petraea - Genetic_Qs21_2015 - LG9 s_1A3HKI_514 SNP 24.60 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1A3HKI_514 SNP 22.00 (cM) Automated name-based View Maps

CMap Contact

Evoltree    BioGeCo    INRA    logo_ff    logo_gmod