CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus petraea-Genetic_Qs29_2015  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG11
Start
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Magnification
Flipped



 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus petraea - Genetic_Qs29_2015 [ View Map Set Info ]
Map Name: LG11
Map Start: 0.00 cM
Map Stop: 36.89 cM
Features by Type:
54 SNP
54 Total

Map Features

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Items 1 to 25 of 54.       of 3 | Next
Quercus petraea - Genetic_Qs29_2015 - LG11
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
s_1AOOHX_2093 SNP 0.00 Quercus petraea - Genetic_Qs21_2015 - LG11 s_1AOOHX_2093 SNP 6.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG11 s_1AOOHX_2093 SNP 9.65 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG11 s_1AOOHX_2093 SNP 7.87 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 s_1AOOHX_2093 SNP 7.70 (cM) Automated name-based View Maps
s_1ASU9F_372 SNP 2.63 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 s_1ASU9F_372 SNP 10.50 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG11 s_1ASU9F_372 SNP 9.57 (cM) Automated name-based View Maps
v_7500_213 SNP 2.63 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 v_7500_213 SNP 13.80 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG11 v_7500_213 SNP 19.30 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG11 v_7500_213 SNP 16.89 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG11 v_7500_213 SNP 15.17 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG11 v_7500_213 SNP 19.73 (cM) Automated name-based View Maps
s_1CP7VO_826 SNP 2.63 Quercus petraea - Genetic_Qs28m_2015 - LG11 s_1CP7VO_826 SNP 16.89 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 s_1CP7VO_826 SNP 13.80 (cM) Automated name-based View Maps
s_1D0V4R_372 SNP 7.03 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 s_1D0V4R_372 SNP 14.90 (cM) Automated name-based View Maps
s_1A9YEN_1201 SNP 7.03 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 s_1A9YEN_1201 SNP 16.40 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG11 s_1A9YEN_1201 SNP 20.26 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG11 s_1A9YEN_1201 SNP 16.36 (cM) Automated name-based View Maps
v_10900_143 SNP 9.66 Quercus petraea - Genetic_Qs28m_2015 - LG11 v_10900_143 SNP 24.76 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG11 v_10900_143 SNP 21.92 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG11 v_10900_143 SNP 27.21 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 v_10900_143 SNP 18.90 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG11 v_10900_143 SNP 19.45 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG11 v_10900_143 SNP 25.16 (cM) Automated name-based View Maps
s_1AGKO2_1197 SNP 9.66 Quercus robur - Genetic_A4_2015 - LG11 s_1AGKO2_1197 SNP 21.33 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 s_1AGKO2_1197 SNP 18.90 (cM) Automated name-based View Maps
s_1B8Q36_624 SNP 9.66 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 s_1B8Q36_624 SNP 18.90 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG11 s_1B8Q36_624 SNP 18.59 (cM) Automated name-based View Maps
s_1B27EQ_786 SNP 9.66 Quercus petraea - Genetic_Qs28f_2015 - LG11 s_1B27EQ_786 SNP 23.73 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG11 s_1B27EQ_786 SNP 23.63 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 s_1B27EQ_786 SNP 18.90 (cM) Automated name-based View Maps
s_1BDGAF_601 SNP 9.66 Quercus petraea - Genetic_Qs28m_2015 - LG11 s_1BDGAF_601 SNP 23.63 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG11 s_1BDGAF_601 SNP 23.73 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 s_1BDGAF_601 SNP 18.90 (cM) Automated name-based View Maps
v_11162_101 SNP 9.66 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 v_11162_101 SNP 18.90 (cM) Automated name-based View Maps
s_1AYP1Y_471 SNP 9.66 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 s_1AYP1Y_471 SNP 18.90 (cM) Automated name-based View Maps
s_1AIO1A_527 SNP 9.66 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 s_1AIO1A_527 SNP 18.90 (cM) Automated name-based View Maps
s_1B3Q92_841 SNP 9.66 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 s_1B3Q92_841 SNP 19.50 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG11 s_1B3Q92_841 SNP 20.59 (cM) Automated name-based View Maps
s_1AKHWA_399 SNP 9.66 Quercus robur - Genetic_A4_2015 - LG11 s_1AKHWA_399 SNP 23.80 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG11 s_1AKHWA_399 SNP 25.32 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 s_1AKHWA_399 SNP 19.70 (cM) Automated name-based View Maps
s_1A5AR5_794 SNP 9.66 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 s_1A5AR5_794 SNP 20.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG11 s_1A5AR5_794 SNP 24.11 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG11 s_1A5AR5_794 SNP 25.32 (cM) Automated name-based View Maps
s_1AMYVS_1070 SNP 9.66 Quercus petraea - Genetic_Qs28f_2015 - LG11 s_1AMYVS_1070 SNP 26.30 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG11 s_1AMYVS_1070 SNP 25.32 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 s_1AMYVS_1070 SNP 20.00 (cM) Automated name-based View Maps
v_1003_130 SNP 9.66 Quercus petraea - Genetic_Qs28m_2015 - LG11 v_1003_130 SNP 25.32 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 v_1003_130 SNP 20.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG11 v_1003_130 SNP 26.30 (cM) Automated name-based View Maps
s_1A8SUH_1159 SNP 12.30 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 s_1A8SUH_1159 SNP 21.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG11 s_1A8SUH_1159 SNP 24.08 (cM) Automated name-based View Maps
s_1ANEQC_338 SNP 12.30 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 s_1ANEQC_338 SNP 21.60 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG11 s_1ANEQC_338 SNP 25.32 (cM) Automated name-based View Maps
s_1BAOU3_553 SNP 12.30 Quercus robur - Genetic_x3P_2015 - LG11 s_1BAOU3_553 SNP 25.01 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 s_1BAOU3_553 SNP 21.90 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG11 s_1BAOU3_553 SNP 25.88 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG11 s_1BAOU3_553 SNP 26.59 (cM) Automated name-based View Maps
s_1A2N9V_322 SNP 12.30 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 s_1A2N9V_322 SNP 21.90 (cM) Automated name-based View Maps
s_2IJLF4_734 SNP 12.30 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 s_2IJLF4_734 SNP 22.10 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG11 s_2IJLF4_734 SNP 25.32 (cM) Automated name-based View Maps
s_1C1GSD_851 SNP 12.30 Quercus petraea - Genetic_Qs28f_2015 - LG11 s_1C1GSD_851 SNP 26.59 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 s_1C1GSD_851 SNP 22.20 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG11 s_1C1GSD_851 SNP 27.57 (cM) Automated name-based View Maps

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