CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus robur x Quercus robur subsp. slavonica-QTL_EF03xSL03_2009_Leaf_morph  (Reference Set)
Min. Correspondence
Align Vertically
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Maps LG12M
Start
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Magnification
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 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
AFLP
eSSR
gSSR
QTL
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: QTL [ View Map Type Info ]
Map Set Name: Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morphology [ View Map Set Info ]
Map Name: LG12M
Map Start: 0.00 cM
Map Stop: 71.07 cM
Features by Type:
5 eSSR
3 QTL
1 gSSR
3 AFLP
12 Total

Map Features

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Items 1 to 12 of 12.
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morphology - LG12M
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
PIE236 eSSR 33.86 Quercus robur - Genetic_3PxA4_2007 - LG12F PIE236 eSSR 18.79 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG12F PIE236 eSSR 35.32 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG12F PIE236 eSSR 35.32 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG12M PIE236 eSSR 65.13 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG12M PIE236 eSSR 33.86 (cM) Automated name-based View Maps
P14/M73_177 AFLP 38.23 Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG12M P14/M73_177 AFLP 38.23 (cM) Automated name-based View Maps
P44/M67_402 AFLP 57.76 Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG12M P44/M67_402 AFLP 57.76 (cM) Automated name-based View Maps
FIR008 eSSR 59.31 Quercus robur - Genetic_3PxA4_2007 - LG12F FIR008 eSSR 86.16 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG12F FIR008 eSSR 64.33 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG12M FIR008 eSSR 59.31 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG12F FIR008 eSSR 64.33 (cM) Automated name-based View Maps
GOT014 eSSR 61.34 Quercus robur - Genetic_3PxA4_2007 - LG12M GOT014 eSSR 65.13 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG12F GOT014 eSSR 86.16 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG12M GOT014 eSSR 61.34 (cM) Automated name-based View Maps
GOT017 eSSR 67.84 Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG12M GOT017 eSSR 67.84 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG1M GOT017 eSSR 29.99 (cM) Automated name-based View Maps
PIE089 eSSR 70.03 Quercus robur - Genetic_3PxA4_2007 - LG12M PIE089 eSSR 52.57 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG12M PIE089 eSSR 70.03 (cM) Automated name-based View Maps
P14/M69_55 AFLP 71.07 Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG12M P14/M69_55 AFLP 71.07 (cM) Automated name-based View Maps
LWR QTL 0.00 - 69.20 Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG2F LWR QTL 32.40 - 43.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG2M LWR QTL 38.10 - 58.10 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG6F LWR QTL 47.90 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG2M LWR QTL 26.70 - 46.70 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG5M LWR QTL 26.10 - 59.90 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG11M LWR QTL 40.40 - 94.84 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph2 - LG10F LWR QTL 46.50 - 82.20 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG1F LWR QTL 62.70 - 71.66 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG7F LWR QTL 12.70 - 47.10 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG5M LWR QTL 35.00 - 63.20 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph1 - LG10F LWR QTL 46.50 - 82.20 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG9M LWR QTL 0.00 - 40.60 (cM) Automated name-based View Maps
EP QTL 24.90 - 57.50 Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG6M EP QTL 0.00 - 10.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG4F EP QTL 47.90 - 78.10 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG5F EP QTL 42.70 - 71.50 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG9F EP QTL 64.50 - 70.50 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG5F EP QTL 96.80 - 111.40 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG3F EP QTL 18.40 - 23.60 (cM) Automated name-based View Maps
LDR QTL 46.70 - 70.90 Quercus robur - QTL_3PxA4_2008_Leaf_morph1 - LG3F LDR QTL 1.90 - 31.70 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG3M LDR QTL 118.50 - 123.65 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG8F LDR QTL 0.00 - 16.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG6F LDR QTL 62.50 - 81.70 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG5F LDR QTL 9.70 - 67.70 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG12F LDR QTL 20.60 - 42.80 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG6M LDR QTL 44.80 - 63.33 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph1 - LG3M LDR QTL 10.60 - 26.40 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph2 - LG3F LDR QTL 1.90 - 31.70 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG3M LDR QTL 65.60 - 85.60 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph2 - LG3M LDR QTL 10.60 - 26.40 (cM) Automated name-based View Maps
ZQR30 gSSR 0.00 Quercus robur - Genetic_3PxA4_2009 - LG12M ZQR30 gSSR 45.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG12M ZQR30 gSSR 55.94 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG12F ZQR30 gSSR 32.23 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG12F ZQR30 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG12F ZQR30 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG12M ZQR30 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG12M ZQR30 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG12 ZQR30 gSSR 61.10 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG12M ZQR30 gSSR 57.26 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG12M ZQR30 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG12F ZQR30 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG12F ZQR30 gSSR 0.00 (cM) Automated name-based View Maps

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