CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Quercus robur-Genetic_3PxA4_2011  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG9Fa
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
EST_SSR
gSSR
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus robur - Genetic_3PxA4_2011 [ View Map Set Info ]
Map Name: LG9Fa
Map Start: 0.00 cM
Map Stop: 30.32 cM
Features by Type:
2 gSSR
2 EST_SSR
4 Total

Map Features

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Items 1 to 4 of 4.
Quercus robur - Genetic_3PxA4_2011 - LG9Fa
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
PIE264 EST_SSR 0.00 Quercus petraea - Genetic_Qs28xQs21_2011 - LG9F PIE264 EST_SSR 40.81 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG9F PIE264 EST_SSR 21.73 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG9M PIE264 EST_SSR 19.41 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG9M PIE264 EST_SSR 34.72 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG9 PIE264 EST_SSR 33.17 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG9 PIE264 EST_SSR 40.22 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG9M PIE264 EST_SSR 25.50 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG9F PIE264 EST_SSR 44.79 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG9M PIE264 EST_SSR 41.85 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG9M PIE264 EST_SSR 25.29 (cM) Automated name-based View Maps
PIE059 EST_SSR 12.27 Quercus petraea - Genetic_Qs28xQs21_2009 - LG9M PIE059 EST_SSR 29.17 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG9Fa PIE059 EST_SSR 32.70 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG9M PIE059 EST_SSR 27.67 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG9F PIE059 EST_SSR 19.90 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG9 PIE059 EST_SSR 42.24 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG9F PIE059 EST_SSR 39.48 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG9 PIE059 EST_SSR 31.15 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG9M PIE059 EST_SSR 29.47 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG9F PIE059 EST_SSR 11.32 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG9F PIE059 EST_SSR 55.47 (cM) Automated name-based View Maps
SQS22 gSSR 18.79 Quercus robur - QTL_3PxA4_2008_Hypoxie - LG9M SQS22 gSSR 29.10 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG9M SQS22 gSSR 29.10 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG9M SQS22 gSSR 47.59 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG9M SQS22 gSSR 26.22 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG9 SQS22 gSSR 19.38 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG9F SQS22 gSSR 32.58 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG9M SQS22 gSSR 10.73 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG9F SQS22 gSSR 43.40 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG9F SQS22 gSSR 43.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG9F SQS22 gSSR 57.04 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG9F SQS22 gSSR 43.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG9M SQS22 gSSR 56.07 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG9M SQS22 gSSR 29.10 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG9F SQS22 gSSR 43.40 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG9M SQS22 gSSR 40.50 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG9M SQS22 gSSR 29.10 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG9M SQS22 gSSR 29.12 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG9M SQS22 gSSR 29.10 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG9M SQS22 gSSR 29.10 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG9F SQS22 gSSR 43.40 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG9F SQS22 gSSR 43.40 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG9F SQS22 gSSR 49.10 (cM) Automated name-based View Maps
ZQR121 gSSR 30.32 Quercus robur - Genetic_3PxA4_2009 - LG9F ZQR121 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG9F ZQR121 gSSR 63.41 (cM) Automated name-based View Maps

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