CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



Save link

* Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link.


General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus robur-Genetic_3PxA4_2011  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG10F
Start
Stop
Magnification
Flipped



 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
EST_SSR
gSSR
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus robur - Genetic_3PxA4_2011 [ View Map Set Info ]
Map Name: LG10F
Map Start: 0.00 cM
Map Stop: 46.20 cM
Features by Type:
9 EST_SSR
5 gSSR
14 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 14 of 14.
Quercus robur - Genetic_3PxA4_2011 - LG10F
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
ZQP62 gSSR 0.00 Quercus robur - Genetic_3PxA4_2007 - LG10M ZQP62 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG10 ZQP62 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG10F ZQP62 gSSR 0.00 (cM) Automated name-based View Maps
FIR023 EST_SSR 7.21 Quercus robur - Genetic_3PxA4_2011 - LG10M FIR023 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG10F FIR023 EST_SSR 42.84 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG10 FIR023 EST_SSR 6.79 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG10F FIR023 EST_SSR 0.00 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG10M FIR023 EST_SSR 16.79 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG10F FIR023 EST_SSR 49.12 (cM) Automated name-based View Maps
PIE041 EST_SSR 10.60 Quercus petraea - Genetic_Qs28xQs21_2011 - LG10F PIE041 EST_SSR 44.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG10 PIE041 EST_SSR 10.47 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG10M PIE041 EST_SSR 3.96 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG10M PIE041 EST_SSR 63.02 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG10 PIE041 EST_SSR 47.97 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG10F PIE041 EST_SSR 57.71 (cM) Automated name-based View Maps
POR028 EST_SSR 13.98 Quercus robur - Genetic_3PxA4_2011 - LG10M POR028 EST_SSR 7.64 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG10F POR028 EST_SSR 55.65 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG10 POR028 EST_SSR 13.78 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG10F POR028 EST_SSR 45.65 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG10F POR028 EST_SSR 5.72 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG10M POR028 EST_SSR 68.42 (cM) Automated name-based View Maps
PIE148 EST_SSR 16.20 Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG10F PIE148 EST_SSR 41.98 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG10 PIE148 EST_SSR 37.37 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG10M PIE148 EST_SSR 57.97 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG10M PIE148 EST_SSR 12.78 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG10M PIE148 EST_SSR 6.47 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG10M PIE148 EST_SSR 31.43 (cM) Automated name-based View Maps
ZQR96 gSSR 19.33 Quercus robur - QTL_3PxA4_2008_Croissance - LG10F ZQR96 gSSR 62.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG10F ZQR96 gSSR 23.66 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG10F ZQR96 gSSR 62.60 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG10F ZQR96 gSSR 33.22 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG10M ZQR96 gSSR 42.15 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG10F ZQR96 gSSR 50.53 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph2 - LG10F ZQR96 gSSR 63.10 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG10F ZQR96 gSSR 62.60 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG10F ZQR96 gSSR 62.60 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG10F ZQR96 gSSR 62.60 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG10F ZQR96 gSSR 62.60 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG10 ZQR96 gSSR 38.86 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG10F ZQR96 gSSR 9.36 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG10 ZQR96 gSSR 20.95 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG10F ZQR96 gSSR 49.39 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG10M ZQR96 gSSR 28.49 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG10F ZQR96 gSSR 62.60 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph1 - LG10F ZQR96 gSSR 63.10 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG10F ZQR96 gSSR 62.60 (cM) Automated name-based View Maps
GOT061 EST_SSR 26.43 No other positions
PIE186 EST_SSR 29.68 Quercus petraea - Genetic_Petraea_Consensus_2011 - LG10 PIE186 EST_SSR 14.62 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG10F PIE186 EST_SSR 8.45 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG10M PIE186 EST_SSR 10.01 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG10F PIE186 EST_SSR 30.67 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG10M PIE186 EST_SSR 34.86 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG10M PIE186 EST_SSR 27.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG10M PIE186 EST_SSR 18.02 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG10F PIE186 EST_SSR 34.00 (cM) Automated name-based View Maps
ZQR25 gSSR 31.24 Quercus robur - QTL_3PxA4_2008_Leaf_morph1 - LG10F ZQR25 gSSR 25.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG10F ZQR25 gSSR 25.60 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG10M ZQR25 gSSR 21.69 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Croissance - LG10F ZQR25 gSSR 25.60 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG10F ZQR25 gSSR 19.30 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG10M ZQR25 gSSR 15.60 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG10F ZQR25 gSSR 25.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG10F ZQR25 gSSR 71.40 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG10F ZQR25 gSSR 25.60 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG10F ZQR25 gSSR 25.60 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG10M ZQR25 gSSR 21.69 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG10F ZQR25 gSSR 25.60 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG10F ZQR25 gSSR 25.60 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG10F ZQR25 gSSR 8.28 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG10F ZQR25 gSSR 26.95 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph2 - LG10F ZQR25 gSSR 25.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG10M ZQR25 gSSR 69.68 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG10 ZQR25 gSSR 49.04 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG10F ZQR25 gSSR 21.91 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG10F ZQR25 gSSR 25.60 (cM) Automated name-based View Maps
POR006 EST_SSR 33.47 Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG10M POR006 EST_SSR 24.90 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG10F POR006 EST_SSR 19.40 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG10 POR006 EST_SSR 22.42 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG10M POR006 EST_SSR 27.71 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG10 POR006 EST_SSR 37.80 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG10M POR006 EST_SSR 61.21 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG10M POR006 EST_SSR 28.25 (cM) Automated name-based View Maps
FIR029 EST_SSR 35.28 No other positions
PIE244 EST_SSR 39.12 Quercus robur - Genetic_AltFxAltM_2011 - LG10F PIE244 EST_SSR 13.80 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG10M PIE244 EST_SSR 28.90 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG10 PIE244 EST_SSR 35.39 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG10F PIE244 EST_SSR 22.90 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG10F PIE244 EST_SSR 16.90 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG10 PIE244 EST_SSR 20.36 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG10M PIE244 EST_SSR 8.42 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG10M PIE244 EST_SSR 26.07 (cM) Automated name-based View Maps
ZQR65 gSSR 42.68 Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG10F ZQR65 gSSR 8.96 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG10M ZQR65 gSSR 35.46 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG10F ZQR65 gSSR 19.40 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG10M ZQR65 gSSR 34.80 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG10F ZQR65 gSSR 19.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG10 ZQR65 gSSR 42.60 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG10F ZQR65 gSSR 13.71 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG10M ZQR65 gSSR 34.80 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph1 - LG10F ZQR65 gSSR 19.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG10F ZQR65 gSSR 23.89 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG10M ZQR65 gSSR 34.80 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG10M ZQR65 gSSR 30.49 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Croissance - LG10F ZQR65 gSSR 19.40 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG10M ZQR65 gSSR 34.80 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG10M ZQR65 gSSR 28.28 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG10 ZQR65 gSSR 15.47 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG10M ZQR65 gSSR 34.80 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG10M ZQR65 gSSR 22.47 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG10M ZQR65 gSSR 37.52 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG10F ZQR65 gSSR 19.40 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG10M ZQR65 gSSR 34.80 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG10F ZQR65 gSSR 77.95 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG10F ZQR65 gSSR 42.21 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph2 - LG10F ZQR65 gSSR 19.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG10F ZQR65 gSSR 19.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG10M ZQR65 gSSR 59.38 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG10F ZQR65 gSSR 19.40 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG10F ZQR65 gSSR 19.40 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG10M ZQR65 gSSR 29.12 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG10F ZQR65 gSSR 19.40 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG10F ZQR65 gSSR 17.64 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG10M ZQR65 gSSR 29.12 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Croissance - LG10M ZQR65 gSSR 34.80 (cM) Automated name-based View Maps
ZQR103 gSSR 46.20 Quercus petraea - Genetic_Petraea_Consensus_2011 - LG10 ZQR103 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG10F ZQR103 gSSR 92.44 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG10M ZQR103 gSSR 0.00 (cM) Automated name-based View Maps

CMap Contact

Evoltree    BioGeCo    INRA    logo_ff    logo_gmod