CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus robur-Genetic_3PxA4_2011  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG11Fa
Start
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Magnification
Flipped



 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
EST_SSR
gSSR
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus robur - Genetic_3PxA4_2011 [ View Map Set Info ]
Map Name: LG11Fa
Map Start: 0.00 cM
Map Stop: 20.55 cM
Features by Type:
1 gSSR
6 EST_SSR
7 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 7 of 7.
Quercus robur - Genetic_3PxA4_2011 - LG11Fa
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
PIE036 EST_SSR 0.00 Quercus robur - Genetic_3PxA4_2009 - LG11M PIE036 EST_SSR 34.44 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG11M PIE036 EST_SSR 35.03 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG11 PIE036 EST_SSR 36.08 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG11F PIE036 EST_SSR 61.91 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG11Mb PIE036 EST_SSR 0.00 (cM) Automated name-based View Maps
FIR031 EST_SSR 5.09 Quercus robur - Genetic_Robur_Consensus_2011 - LG11 FIR031 EST_SSR 54.56 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG11Fb FIR031 EST_SSR 4.18 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG11Fa FIR031 EST_SSR 9.75 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG3M FIR031 EST_SSR 8.09 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG11Mb FIR031 EST_SSR 21.72 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG11F FIR031 EST_SSR 84.83 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG11a FIR031 EST_SSR 10.74 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG3F FIR031 EST_SSR 8.74 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG11Mb FIR031 EST_SSR 17.55 (cM) Automated name-based View Maps
PIE250 EST_SSR 8.26 Quercus robur - Genetic_3PxA4_2009 - LG11F PIE250 EST_SSR 70.16 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG11Ma PIE250 EST_SSR 18.80 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG11F PIE250 EST_SSR 24.37 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG11a PIE250 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG11Fa PIE250 EST_SSR 4.06 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG11M PIE250 EST_SSR 9.49 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG11F PIE250 EST_SSR 8.75 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG11Fb PIE250 EST_SSR 10.19 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG11Mb PIE250 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG11 PIE250 EST_SSR 45.06 (cM) Automated name-based View Maps
PIE275 EST_SSR 10.26 Quercus robur - Genetic_3PxA4_2009 - LG11M PIE275 EST_SSR 43.76 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG1M PIE275 EST_SSR 22.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG11Mb PIE275 EST_SSR 12.14 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG11F PIE275 EST_SSR 72.81 (cM) Automated name-based View Maps
PIE144 EST_SSR 12.98 Quercus petraea - Genetic_Qs28xQs21_2009 - LG11Ma PIE144 EST_SSR 9.19 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG11a PIE144 EST_SSR 6.79 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG11F PIE144 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG11M PIE144 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG11Fa PIE144 EST_SSR 7.01 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG11Fb PIE144 EST_SSR 6.74 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG11 PIE144 EST_SSR 60.19 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG11Mb PIE144 EST_SSR 8.43 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG11M PIE144 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG1M PIE144 EST_SSR 0.00 (cM) Automated name-based View Maps
ZQR111 gSSR 16.03 Quercus robur - QTL_3PxA4_2008_Debourrement - LG11M ZQR111 gSSR 57.90 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG11M ZQR111 gSSR 23.77 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG11F ZQR111 gSSR 18.05 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG11Mb ZQR111 gSSR 7.30 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG11M ZQR111 gSSR 33.43 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG11F ZQR111 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG11M ZQR111 gSSR 57.90 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG11F ZQR111 gSSR 17.70 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG11M ZQR111 gSSR 57.90 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG11F ZQR111 gSSR 17.70 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG11M ZQR111 gSSR 57.90 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG11F ZQR111 gSSR 17.70 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG11M ZQR111 gSSR 57.90 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG11M ZQR111 gSSR 40.45 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG11 ZQR111 gSSR 49.12 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG1M ZQR111 gSSR 13.59 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG11F ZQR111 gSSR 17.70 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG11F ZQR111 gSSR 17.70 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG11M ZQR111 gSSR 57.90 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Croissance - LG11F ZQR111 gSSR 17.70 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG11F ZQR111 gSSR 17.70 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG11F ZQR111 gSSR 17.70 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG11F ZQR111 gSSR 16.94 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG11F ZQR111 gSSR 20.33 (cM) Automated name-based View Maps
GOT035 EST_SSR 20.55 Quercus robur - Genetic_3PxA4_2009 - LG11F GOT035 EST_SSR 80.02 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG11 GOT035 EST_SSR 61.31 (cM) Automated name-based View Maps

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