CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



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 Map Options
 Map Options

Map Set Quercus robur x Quercus petraea-Genetic_11PxQs29_2011  (Reference Set)
Min. Correspondence
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Maps LG1M
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 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
EST_SSR
gSSR
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 [ View Map Set Info ]
Map Name: LG1M
Map Start: 0.00 cM
Map Stop: 60.04 cM
Features by Type:
6 EST_SSR
1 gSSR
7 Total

Map Features

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Items 1 to 7 of 7.
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG1M
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
ZQR74 gSSR 0.00 Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG1M ZQR74 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG1F ZQR74 gSSR 48.50 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG1F ZQR74 gSSR 48.50 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG1F ZQR74 gSSR 71.66 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG1M ZQR74 gSSR 75.32 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG1M ZQR74 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG1F ZQR74 gSSR 48.50 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG1F ZQR74 gSSR 19.28 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG1F ZQR74 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph2 - LG1F ZQR74 gSSR 49.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG1M ZQR74 gSSR 10.13 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG1M ZQR74 gSSR 8.59 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG1F ZQR74 gSSR 16.89 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG1F ZQR74 gSSR 48.50 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG1 ZQR74 gSSR 20.83 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG1F ZQR74 gSSR 48.50 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph1 - LG1M ZQR74 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG1M ZQR74 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG1M ZQR74 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG1F ZQR74 gSSR 27.78 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph1 - LG1F ZQR74 gSSR 49.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph2 - LG1M ZQR74 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG1Fa ZQR74 gSSR 10.85 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG1M ZQR74 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG1M ZQR74 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG1F ZQR74 gSSR 48.50 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG1F ZQR74 gSSR 28.50 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG1F ZQR74 gSSR 71.66 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG1F ZQR74 gSSR 15.28 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG1M ZQR74 gSSR 0.00 (cM) Automated name-based View Maps
WAG066 EST_SSR 6.48 Quercus robur - Genetic_AltFxAltM_2011 - LG1F WAG066 EST_SSR 0.15 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG1 WAG066 EST_SSR 2.95 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG1 WAG066 EST_SSR 22.89 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG1M WAG066 EST_SSR 43.28 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG1M WAG066 EST_SSR 43.48 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG1F WAG066 EST_SSR 50.24 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG1F WAG066 EST_SSR 16.62 (cM) Automated name-based View Maps
GOT009 EST_SSR 11.47 Castanea sativa - Genetic_BursaxHoppa_2009 - LG12M GOT009 EST_SSR 18.58 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG12F GOT009 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG1F GOT009 EST_SSR 33.17 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG12 GOT009 EST_SSR 2.56 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG12M GOT009 EST_SSR 40.13 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG12M GOT009 EST_SSR 4.19 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG1M GOT009 EST_SSR 32.56 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG1 GOT009 EST_SSR 53.08 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG12M GOT009 EST_SSR 3.63 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG1 GOT009 EST_SSR 7.33 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG12 GOT009 EST_SSR 3.66 (cM) Automated name-based View Maps
GOT017 EST_SSR 24.64 Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG1Fa GOT017 EST_SSR 33.61 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG1F GOT017 EST_SSR 29.61 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG1M GOT017 EST_SSR 52.11 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG12M GOT017 EST_SSR 2.18 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG1M GOT017 EST_SSR 47.36 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG1 GOT017 EST_SSR 27.29 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG1F GOT017 EST_SSR 31.96 (cM) Automated name-based View Maps
PIE122 EST_SSR 42.93 Quercus petraea - Genetic_Petraea_Consensus_2011 - LG1 PIE122 EST_SSR 44.08 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG1F PIE122 EST_SSR 5.70 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG1 PIE122 EST_SSR 70.08 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG1M PIE122 EST_SSR 9.15 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG1F PIE122 EST_SSR 46.32 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG1F PIE122 EST_SSR 49.84 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG1Fb PIE122 EST_SSR 0.00 (cM) Automated name-based View Maps
WAG011 EST_SSR 50.49 Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG1F WAG011 EST_SSR 55.99 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG1F WAG011 EST_SSR 60.87 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG1Fb WAG011 EST_SSR 7.74 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG1F WAG011 EST_SSR 59.13 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG1F WAG011 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG1M WAG011 EST_SSR 1.81 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG1 WAG011 EST_SSR 53.50 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG1M WAG011 EST_SSR 1.99 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG1M WAG011 EST_SSR 86.68 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG1M WAG011 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG1 WAG011 EST_SSR 75.56 (cM) Automated name-based View Maps
POR015 EST_SSR 60.04 Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG1Fb POR015 EST_SSR 11.79 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG1 POR015 EST_SSR 57.62 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG1M POR015 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG1 POR015 EST_SSR 83.82 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG1M POR015 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG1F POR015 EST_SSR 60.16 (cM) Automated name-based View Maps

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