CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus robur x Quercus petraea-Genetic_11PxQs29_2011  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG8M
Start
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Magnification
Flipped



 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
EST_SSR
gSSR
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 [ View Map Set Info ]
Map Name: LG8M
Map Start: 0.00 cM
Map Stop: 54.47 cM
Features by Type:
1 gSSR
10 EST_SSR
11 Total

Map Features

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Items 1 to 11 of 11.
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG8M
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
PIE249 EST_SSR 0.00 Quercus petraea - Genetic_Petraea_Consensus_2011 - LG8 PIE249 EST_SSR 51.25 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG8 PIE249 EST_SSR 74.75 (cM) Automated name-based View Maps
WAG014 EST_SSR 1.75 Quercus robur - Genetic_AltFxAltM_2009 - LG8F WAG014 EST_SSR 63.44 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG8F WAG014 EST_SSR 41.99 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG8Mb WAG014 EST_SSR 0.00 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG7F WAG014 EST_SSR 4.71 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG8 WAG014 EST_SSR 49.25 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG8Mb WAG014 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG8 WAG014 EST_SSR 72.54 (cM) Automated name-based View Maps
PIE204 EST_SSR 7.05 Quercus petraea - Genetic_Petraea_Consensus_2011 - LG8 PIE204 EST_SSR 44.02 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG8M PIE204 EST_SSR 17.24 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG8F PIE204 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG8F PIE204 EST_SSR 34.79 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG8F PIE204 EST_SSR 43.47 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG8M PIE204 EST_SSR 46.48 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG8 PIE204 EST_SSR 64.51 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG8F PIE204 EST_SSR 21.63 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG8M PIE204 EST_SSR 42.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG8M PIE204 EST_SSR 50.17 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG8F PIE204 EST_SSR 49.33 (cM) Automated name-based View Maps
VIT013 EST_SSR 9.06 Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG8F VIT013 EST_SSR 18.24 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG8M VIT013 EST_SSR 44.15 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG8 VIT013 EST_SSR 42.58 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG8F VIT013 EST_SSR 37.46 (cM) Automated name-based View Maps
PIE175 EST_SSR 16.86 Quercus robur - Genetic_AltFxAltM_2011 - LG8F PIE175 EST_SSR 5.56 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG8M PIE175 EST_SSR 40.93 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG8F PIE175 EST_SSR 43.53 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG8M PIE175 EST_SSR 41.62 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG8M PIE175 EST_SSR 37.73 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG8M PIE175 EST_SSR 28.10 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG8F PIE175 EST_SSR 39.17 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG8F PIE175 EST_SSR 30.37 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG8Ma PIE175 EST_SSR 3.79 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG8Ma PIE175 EST_SSR 39.31 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG8 PIE175 EST_SSR 55.56 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG8F PIE175 EST_SSR 37.28 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG8F PIE175 EST_SSR 25.94 (cM) Automated name-based View Maps
PIE129 EST_SSR 20.21 Quercus petraea - Genetic_Petraea_Consensus_2011 - LG8 PIE129 EST_SSR 29.93 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG8M PIE129 EST_SSR 34.48 (cM) Automated name-based View Maps
PIE011 EST_SSR 23.49 Quercus robur - Genetic_Robur_Consensus_2011 - LG8 PIE011 EST_SSR 39.42 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG8M PIE011 EST_SSR 24.77 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG8F PIE011 EST_SSR 53.26 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG8F PIE011 EST_SSR 39.09 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG8M PIE011 EST_SSR 29.99 (cM) Automated name-based View Maps
POR008 EST_SSR 25.63 Castanea sativa - Genetic_BursaxHoppa_2009 - LG7F POR008 EST_SSR 3.18 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG7M POR008 EST_SSR 16.00 (cM) Automated name-based View Maps
PIE023 EST_SSR 28.25 Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG8F PIE023 EST_SSR 56.54 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG8 PIE023 EST_SSR 37.88 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG8F PIE023 EST_SSR 20.86 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG8F PIE023 EST_SSR 27.09 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG8M PIE023 EST_SSR 26.57 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG8M PIE023 EST_SSR 27.07 (cM) Automated name-based View Maps
ZQR5a gSSR 38.43 Quercus robur - QTL_3PxA4_2008_CO2_response - LG8M ZQR5a gSSR 58.10 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG8M ZQR5a gSSR 58.10 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG8F ZQR5a gSSR 15.36 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG8M ZQR5a gSSR 58.10 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG8M ZQR5a gSSR 58.10 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG8F ZQR5a gSSR 20.40 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG8M ZQR5a gSSR 21.92 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG8M ZQR5a gSSR 17.16 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG8F ZQR5a gSSR 59.98 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG8F ZQR5a gSSR 20.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG8 ZQR5a gSSR 33.47 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG8M ZQR5a gSSR 72.67 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG8F ZQR5a gSSR 42.02 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG8M ZQR5a gSSR 58.10 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG8M ZQR5a gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG8F ZQR5a gSSR 15.73 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG8F ZQR5a gSSR 20.40 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG8M ZQR5a gSSR 60.52 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG8 ZQR5a gSSR 18.10 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG8F ZQR5a gSSR 20.40 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG8M ZQR5a gSSR 58.10 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG8F ZQR5a gSSR 20.40 (cM) Automated name-based View Maps
FIR081 EST_SSR 54.47 Quercus petraea - Genetic_Qs28xQs21_2011 - LG8Ma FIR081 EST_SSR 57.83 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG7M FIR081 EST_SSR 40.42 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG8F FIR081 EST_SSR 5.19 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG7M FIR081 EST_SSR 44.35 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG7F FIR081 EST_SSR 40.73 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG7 FIR081 EST_SSR 40.51 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG8F FIR081 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG8M FIR081 EST_SSR 2.64 (cM) Automated name-based View Maps

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