CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus robur x Quercus petraea-Genetic_11PxQs29_2011  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG11F
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Magnification
Flipped



 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
EST_SSR
gSSR
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 [ View Map Set Info ]
Map Name: LG11F
Map Start: 0.00 cM
Map Stop: 69.31 cM
Features by Type:
4 gSSR
5 EST_SSR
9 Total

Map Features

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Items 1 to 9 of 9.
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG11F
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
PIE144 EST_SSR 0.00 Quercus robur - Genetic_AltFxAltM_2011 - LG11M PIE144 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG11M PIE144 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG11Mb PIE144 EST_SSR 8.43 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG11Fb PIE144 EST_SSR 6.74 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG11Fa PIE144 EST_SSR 7.01 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG11 PIE144 EST_SSR 60.19 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG1M PIE144 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG11Ma PIE144 EST_SSR 9.19 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG11Fa PIE144 EST_SSR 12.98 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG11a PIE144 EST_SSR 6.79 (cM) Automated name-based View Maps
PIE257 EST_SSR 16.44 Quercus robur - Genetic_AltFxAltM_2009 - LG11F PIE257 EST_SSR 40.86 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG11Fa PIE257 EST_SSR 13.52 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG11Mb PIE257 EST_SSR 15.58 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG11F PIE257 EST_SSR 2.80 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG11 PIE257 EST_SSR 51.07 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG11Fb PIE257 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG11Ma PIE257 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG11F PIE257 EST_SSR 71.30 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG1M PIE257 EST_SSR 11.68 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG11M PIE257 EST_SSR 12.72 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG11F PIE257 EST_SSR 42.74 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG11M PIE257 EST_SSR 3.59 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG11F PIE257 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG11a PIE257 EST_SSR 16.10 (cM) Automated name-based View Maps
ZQR111 gSSR 18.05 Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG11F ZQR111 gSSR 17.70 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG11Mb ZQR111 gSSR 7.30 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG11M ZQR111 gSSR 57.90 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG11M ZQR111 gSSR 40.45 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG11M ZQR111 gSSR 57.90 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG11M ZQR111 gSSR 57.90 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG11F ZQR111 gSSR 17.70 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG11F ZQR111 gSSR 17.70 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG11F ZQR111 gSSR 20.33 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG11F ZQR111 gSSR 17.70 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG11F ZQR111 gSSR 17.70 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG11M ZQR111 gSSR 57.90 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG11F ZQR111 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG1M ZQR111 gSSR 13.59 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG11Fa ZQR111 gSSR 16.03 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG11F ZQR111 gSSR 16.94 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Croissance - LG11F ZQR111 gSSR 17.70 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG11F ZQR111 gSSR 17.70 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG11M ZQR111 gSSR 57.90 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG11M ZQR111 gSSR 57.90 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG11F ZQR111 gSSR 17.70 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG11M ZQR111 gSSR 33.43 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG11 ZQR111 gSSR 49.12 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG11M ZQR111 gSSR 23.77 (cM) Automated name-based View Maps
PIE250 EST_SSR 24.37 Quercus petraea - Genetic_Petraea_Consensus_2011 - LG11a PIE250 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG11F PIE250 EST_SSR 8.75 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG11 PIE250 EST_SSR 45.06 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG11M PIE250 EST_SSR 9.49 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG11Fa PIE250 EST_SSR 8.26 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG11Mb PIE250 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG11Fa PIE250 EST_SSR 4.06 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG11Ma PIE250 EST_SSR 18.80 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG11Fb PIE250 EST_SSR 10.19 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG11F PIE250 EST_SSR 70.16 (cM) Automated name-based View Maps
MCS1 gSSR 37.26 Castanea sativa - Genetic_BursaxHoppa_2009 - LG11M MCS1 gSSR 11.36 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG11F MCS1 gSSR 20.74 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG7M MCS1 gSSR 39.68 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG3 MCS1 gSSR 43.46 (cM) Automated name-based View Maps
PIE202 EST_SSR 52.12 Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG11F PIE202 EST_SSR 49.09 (cM) Automated name-based View Maps
PIE004 EST_SSR 57.09 Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG11F PIE004 EST_SSR 46.68 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG11F PIE004 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG11F PIE004 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG11Fa PIE004 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG11Fb PIE004 EST_SSR 8.16 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG11 PIE004 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG11b PIE004 EST_SSR 4.08 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG11Ma PIE004 EST_SSR 5.75 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG11F PIE004 EST_SSR 49.92 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG11M PIE004 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG11M PIE004 EST_SSR 73.26 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG11Mb PIE004 EST_SSR 5.75 (cM) Automated name-based View Maps
ZQR4 gSSR 61.89 Quercus robur - Genetic_3PxA4_2007 - LG11M ZQR4 gSSR 79.94 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG11F ZQR4 gSSR 41.23 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG11Ma ZQR4 gSSR 0.43 (cM) Automated name-based View Maps
MCS11 gSSR 69.31 Quercus robur - Genetic_Robur_Consensus_2011 - LG11 MCS11 gSSR 14.66 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG5M MCS11 gSSR 6.36 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG7F MCS11 gSSR 64.40 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG11F MCS11 gSSR 36.00 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG5F MCS11 gSSR 3.58 (cM) Automated name-based View Maps

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