CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus robur x Quercus robur subsp. slavonica-Genetic_EF03xSL03_2011  (Reference Set)
Min. Correspondence
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Maps LG1F
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 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
EST_SSR
gSSR
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 [ View Map Set Info ]
Map Name: LG1F
Map Start: 0.00 cM
Map Stop: 57.34 cM
Features by Type:
10 EST_SSR
2 gSSR
12 Total

Map Features

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Items 1 to 12 of 12.
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG1F
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
ZQR74 gSSR 0.00 Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG1F ZQR74 gSSR 71.66 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG1Fa ZQR74 gSSR 10.85 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG1M ZQR74 gSSR 10.13 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG1F ZQR74 gSSR 28.50 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG1M ZQR74 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG1M ZQR74 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG1F ZQR74 gSSR 16.89 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG1F ZQR74 gSSR 48.50 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG1F ZQR74 gSSR 15.28 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG1F ZQR74 gSSR 48.50 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph1 - LG1F ZQR74 gSSR 49.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG1F ZQR74 gSSR 19.28 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG1M ZQR74 gSSR 75.32 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG1F ZQR74 gSSR 48.50 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG1F ZQR74 gSSR 48.50 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG1M ZQR74 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph1 - LG1M ZQR74 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG1F ZQR74 gSSR 48.50 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG1F ZQR74 gSSR 27.78 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph2 - LG1M ZQR74 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG1M ZQR74 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG1M ZQR74 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG1M ZQR74 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG1 ZQR74 gSSR 20.83 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG1M ZQR74 gSSR 8.59 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG1F ZQR74 gSSR 48.50 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph2 - LG1F ZQR74 gSSR 49.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG1F ZQR74 gSSR 71.66 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG1M ZQR74 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG1M ZQR74 gSSR 0.00 (cM) Automated name-based View Maps
ZQR101 gSSR 3.27 Quercus robur - Genetic_3PxA4_2011 - LG1F ZQR101 gSSR 33.41 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG1F ZQR101 gSSR 68.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG1M ZQR101 gSSR 46.18 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG1F ZQR101 gSSR 68.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG1 ZQR101 gSSR 27.41 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG1F ZQR101 gSSR 49.79 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG1F ZQR101 gSSR 67.76 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG1F ZQR101 gSSR 1.78 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG1M ZQR101 gSSR 68.89 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph2 - LG1F ZQR101 gSSR 69.70 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG1Fa ZQR101 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG1M ZQR101 gSSR 74.09 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG1F ZQR101 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG1F ZQR101 gSSR 68.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG1F ZQR101 gSSR 68.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG1F ZQR101 gSSR 67.76 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG1F ZQR101 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG1F ZQR101 gSSR 68.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph1 - LG1F ZQR101 gSSR 69.70 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG1 ZQR101 gSSR 1.33 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG1F ZQR101 gSSR 50.27 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG1F ZQR101 gSSR 68.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG1F ZQR101 gSSR 27.78 (cM) Automated name-based View Maps
GOT011 EST_SSR 8.25 Quercus robur - Genetic_3PxA4_2011 - LG1M GOT011 EST_SSR 87.57 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG1M GOT011 EST_SSR 62.14 (cM) Automated name-based View Maps
PIE076 EST_SSR 12.42 Quercus robur - Genetic_Robur_Consensus_2011 - LG1 PIE076 EST_SSR 16.41 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG1Fa PIE076 EST_SSR 15.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG1F PIE076 EST_SSR 10.70 (cM) Automated name-based View Maps
PIE238 EST_SSR 23.82 Quercus robur - Genetic_3PxA4_2011 - LG1M PIE238 EST_SSR 77.31 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG1 PIE238 EST_SSR 20.24 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG1M PIE238 EST_SSR 29.26 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG1 PIE238 EST_SSR 43.59 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG1F PIE238 EST_SSR 8.90 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG1M PIE238 EST_SSR 44.79 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG1F PIE238 EST_SSR 44.11 (cM) Automated name-based View Maps
FIR028 EST_SSR 24.57 Quercus robur - Genetic_AltFxAltM_2009 - LG1F FIR028 EST_SSR 38.14 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG1M FIR028 EST_SSR 66.22 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG1F FIR028 EST_SSR 10.06 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG1 FIR028 EST_SSR 39.68 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG1M FIR028 EST_SSR 28.70 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG1F FIR028 EST_SSR 58.14 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG1 FIR028 EST_SSR 20.98 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG1M FIR028 EST_SSR 29.32 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG6M FIR028 EST_SSR 49.29 (cM) Automated name-based View Maps
POR040 EST_SSR 28.95 Quercus robur - Genetic_Robur_Consensus_2011 - LG1 POR040 EST_SSR 48.18 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG1F POR040 EST_SSR 27.09 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG1M POR040 EST_SSR 37.71 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG1 POR040 EST_SSR 28.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG1F POR040 EST_SSR 25.26 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG1M POR040 EST_SSR 22.83 (cM) Automated name-based View Maps
POR047 EST_SSR 31.74 Quercus robur - Genetic_Robur_Consensus_2011 - LG1 POR047 EST_SSR 50.41 (cM) Automated name-based View Maps
GOT009 EST_SSR 33.17 Quercus petraea - Genetic_Petraea_Consensus_2011 - LG1 GOT009 EST_SSR 7.33 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG12M GOT009 EST_SSR 3.63 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG1M GOT009 EST_SSR 32.56 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG1 GOT009 EST_SSR 53.08 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG1M GOT009 EST_SSR 11.47 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG12 GOT009 EST_SSR 2.56 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG12M GOT009 EST_SSR 4.19 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG12M GOT009 EST_SSR 18.58 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG12F GOT009 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG12M GOT009 EST_SSR 40.13 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG12 GOT009 EST_SSR 3.66 (cM) Automated name-based View Maps
GOT008 EST_SSR 39.46 Quercus robur - Genetic_3PxA4_2009 - LG1F GOT008 EST_SSR 43.06 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG1F GOT008 EST_SSR 17.25 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG1 GOT008 EST_SSR 59.02 (cM) Automated name-based View Maps
PIE043 EST_SSR 55.64 Quercus robur - Genetic_Robur_Consensus_2011 - LG1 PIE043 EST_SSR 72.48 (cM) Automated name-based View Maps
FIR040 EST_SSR 57.34 Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG1M FIR040 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG1Fb FIR040 EST_SSR 16.25 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG1 FIR040 EST_SSR 80.14 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG1F FIR040 EST_SSR 63.11 (cM) Automated name-based View Maps

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