CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus robur x Quercus robur subsp. slavonica-Genetic_EF03xSL03_2011  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG3M
Start
Stop
Magnification
Flipped



 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
EST_SSR
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 [ View Map Set Info ]
Map Name: LG3M
Map Start: 0.00 cM
Map Stop: 67.30 cM
Features by Type:
10 EST_SSR
10 Total

Map Features

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[ Download Feature Correspondence Data ]
Items 1 to 10 of 10.
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG3M
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
POR003 EST_SSR 0.00 Quercus robur - Genetic_3PxA4_2011 - LG3Fa POR003 EST_SSR 61.95 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG3Mb POR003 EST_SSR 18.56 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG7M POR003 EST_SSR 0.03 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG3F POR003 EST_SSR 48.51 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG7F POR003 EST_SSR 2.05 (cM) Automated name-based View Maps
PIE242 EST_SSR 11.11 Quercus robur - Genetic_Robur_Consensus_2011 - LG3 PIE242 EST_SSR 55.17 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG3Ma PIE242 EST_SSR 68.27 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG3F PIE242 EST_SSR 59.88 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG3F PIE242 EST_SSR 45.90 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG3 PIE242 EST_SSR 19.14 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG3Fa PIE242 EST_SSR 41.32 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG3M PIE242 EST_SSR 47.72 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG3Mb PIE242 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG3M PIE242 EST_SSR 45.47 (cM) Automated name-based View Maps
PIE027 EST_SSR 23.74 Quercus robur - Genetic_3PxA4_2011 - LG3Fa PIE027 EST_SSR 36.33 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG3F PIE027 EST_SSR 25.77 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG3Fa PIE027 EST_SSR 3.14 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG3F PIE027 EST_SSR 35.78 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG3 PIE027 EST_SSR 43.65 (cM) Automated name-based View Maps
PIE267 EST_SSR 26.56 Quercus robur - Genetic_AltFxAltM_2011 - LG3F PIE267 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG3M PIE267 EST_SSR 50.16 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG3 PIE267 EST_SSR 41.73 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG3F PIE267 EST_SSR 39.42 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG3Mb PIE267 EST_SSR 22.91 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG3F PIE267 EST_SSR 27.83 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG3 PIE267 EST_SSR 26.30 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG3Ma PIE267 EST_SSR 53.80 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG3M PIE267 EST_SSR 37.77 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG3F PIE267 EST_SSR 23.49 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG3M PIE267 EST_SSR 39.80 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG3Fa PIE267 EST_SSR 34.21 (cM) Automated name-based View Maps
POR011 EST_SSR 29.67 Quercus petraea - Genetic_Qs28xQs21_2011 - LG3M POR011 EST_SSR 38.34 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG3F POR011 EST_SSR 40.77 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG3M POR011 EST_SSR 36.31 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG8M POR011 EST_SSR 25.69 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG3 POR011 EST_SSR 38.26 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG3F POR011 EST_SSR 39.60 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG3F POR011 EST_SSR 32.26 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG3Mb POR011 EST_SSR 0.00 (cM) Automated name-based View Maps
PIE021 EST_SSR 39.95 Quercus robur - Genetic_Robur_Consensus_2011 - LG3 PIE021 EST_SSR 29.18 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG3F PIE021 EST_SSR 33.91 (cM) Automated name-based View Maps
GOT021 EST_SSR 41.27 Quercus petraea - Genetic_Qs28xQs21_2009 - LG3F GOT021 EST_SSR 29.37 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG3Fa GOT021 EST_SSR 24.73 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG3Ma GOT021 EST_SSR 39.03 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG3 GOT021 EST_SSR 27.92 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG3M GOT021 EST_SSR 39.43 (cM) Automated name-based View Maps
FIR075 EST_SSR 42.72 Quercus robur - Genetic_3PxA4_2011 - LG3Ma FIR075 EST_SSR 38.96 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG3Fa FIR075 EST_SSR 23.02 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG3 FIR075 EST_SSR 34.95 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG3F FIR075 EST_SSR 30.61 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG5M FIR075 EST_SSR 3.90 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG3F FIR075 EST_SSR 29.37 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG3M FIR075 EST_SSR 30.58 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG5F FIR075 EST_SSR 1.45 (cM) Automated name-based View Maps
PIE075 EST_SSR 60.09 Quercus robur - Genetic_Robur_Consensus_2011 - LG3 PIE075 EST_SSR 4.07 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG3F PIE075 EST_SSR 3.45 (cM) Automated name-based View Maps
PIE135 EST_SSR 67.30 Quercus petraea - Genetic_Petraea_Consensus_2011 - LG3 PIE135 EST_SSR 64.76 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG3M PIE135 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG3 PIE135 EST_SSR 12.70 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG3M PIE135 EST_SSR 14.04 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG3M PIE135 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG3F PIE135 EST_SSR 0.25 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG3Ma PIE135 EST_SSR 13.17 (cM) Automated name-based View Maps

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