CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus robur x Quercus robur subsp. slavonica-Genetic_EF03xSL03_2011  (Reference Set)
Min. Correspondence
Align Vertically
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Maps LG7F
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Magnification
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 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
EST_SSR
gSSR
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 [ View Map Set Info ]
Map Name: LG7F
Map Start: 0.00 cM
Map Stop: 49.61 cM
Features by Type:
6 EST_SSR
2 gSSR
8 Total

Map Features

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Items 1 to 8 of 8.
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG7F
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
ZQP9 gSSR 0.00 Quercus robur - Genetic_3PxA4_2011 - LG7F ZQP9 gSSR 11.04 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG7M ZQP9 gSSR 89.41 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG7F ZQP9 gSSR 84.88 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG7M ZQP9 gSSR 11.85 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG7F ZQP9 gSSR 84.88 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG7F ZQP9 gSSR 36.05 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG5F ZQP9 gSSR 42.98 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG7M ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG7M ZQP9 gSSR 37.71 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG7M ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG7M ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Croissance - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG7M ZQP9 gSSR 3.52 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG7M ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG7M ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG7M ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG5M ZQP9 gSSR 29.14 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG7M ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG7F ZQP9 gSSR 103.46 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG7M ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG7M ZQP9 gSSR 65.80 (cM) Automated name-based View Maps
POR025 EST_SSR 8.90 Quercus petraea - Genetic_Qs28xQs21_2009 - LG7F POR025 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG7F POR025 EST_SSR 1.03 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG7M POR025 EST_SSR 42.03 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG7Fa POR025 EST_SSR 26.21 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG7M POR025 EST_SSR 47.39 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG7F POR025 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG7M POR025 EST_SSR 77.96 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG7 POR025 EST_SSR 57.47 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG7 POR025 EST_SSR 1.09 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG7F POR025 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG7M POR025 EST_SSR 16.17 (cM) Automated name-based View Maps
PIE192 EST_SSR 14.28 Quercus robur - Genetic_Robur_Consensus_2011 - LG7 PIE192 EST_SSR 47.26 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG3F PIE192 EST_SSR 19.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG3Fa PIE192 EST_SSR 29.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG3 PIE192 EST_SSR 34.43 (cM) Automated name-based View Maps
FIR095 EST_SSR 15.59 Castanea sativa - Genetic_BursaxHoppa_2009 - LG1F FIR095 EST_SSR 16.65 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG7F FIR095 EST_SSR 13.72 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG7 FIR095 EST_SSR 17.08 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG7F FIR095 EST_SSR 38.42 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG7M FIR095 EST_SSR 26.07 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG7F FIR095 EST_SSR 10.03 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG7M FIR095 EST_SSR 20.06 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG7M FIR095 EST_SSR 23.35 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG7M FIR095 EST_SSR 32.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG7F FIR095 EST_SSR 14.73 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG1M FIR095 EST_SSR 35.63 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG7 FIR095 EST_SSR 45.01 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG7M FIR095 EST_SSR 40.23 (cM) Automated name-based View Maps
ZQP105 gSSR 19.81 Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG7F ZQP105 gSSR 52.92 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG7F ZQP105 gSSR 52.92 (cM) Automated name-based View Maps
GOT004 EST_SSR 37.06 Quercus petraea - Genetic_Petraea_Consensus_2011 - LG7 GOT004 EST_SSR 37.12 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG7F GOT004 EST_SSR 49.09 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG2M GOT004 EST_SSR 39.48 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG7 GOT004 EST_SSR 23.46 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG7M GOT004 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG7M GOT004 EST_SSR 11.16 (cM) Automated name-based View Maps
PIE014 EST_SSR 38.15 Castanea sativa - Genetic_BursaxHoppa_2009 - LG5M PIE014 EST_SSR 3.05 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG5F PIE014 EST_SSR 1.49 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG8F PIE014 EST_SSR 20.99 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG7M PIE014 EST_SSR 8.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG7 PIE014 EST_SSR 21.86 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG7F PIE014 EST_SSR 47.45 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG8Ma PIE014 EST_SSR 16.64 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG7M PIE014 EST_SSR 1.40 (cM) Automated name-based View Maps
PIE137 EST_SSR 49.61 Quercus robur - Genetic_3PxA4_2009 - LG7F PIE137 EST_SSR 51.79 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG7 PIE137 EST_SSR 39.37 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG7M PIE137 EST_SSR 42.93 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG7M PIE137 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG7F PIE137 EST_SSR 45.66 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG7F PIE137 EST_SSR 64.09 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG7F PIE137 EST_SSR 43.71 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG7 PIE137 EST_SSR 8.17 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG7Fb PIE137 EST_SSR 5.97 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG7F PIE137 EST_SSR 53.23 (cM) Automated name-based View Maps

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