CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus robur x Quercus robur subsp. slavonica-Genetic_EF03xSL03_2011  (Reference Set)
Min. Correspondence
Align Vertically
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Maps LG9F
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Magnification
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 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
EST_SSR
gSSR
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 [ View Map Set Info ]
Map Name: LG9F
Map Start: 0.00 cM
Map Stop: 62.10 cM
Features by Type:
6 EST_SSR
2 gSSR
8 Total

Map Features

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Items 1 to 8 of 8.
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG9F
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
ZQR15 gSSR 0.00 Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG9F ZQR15 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG9F ZQR15 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG9M ZQR15 gSSR 66.30 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG9F ZQR15 gSSR 103.14 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG9F ZQR15 gSSR 9.70 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG9M ZQR15 gSSR 54.80 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG9F ZQR15 gSSR 73.13 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG9M ZQR15 gSSR 53.79 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG9F ZQR15 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG9M ZQR15 gSSR 54.80 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG9F ZQR15 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG9F ZQR15 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG9F ZQR15 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG9M ZQR15 gSSR 54.80 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG9M ZQR15 gSSR 54.80 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG3Fb ZQR15 gSSR 16.31 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG9F ZQR15 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG9M ZQR15 gSSR 54.80 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG9 ZQR15 gSSR 1.52 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG9F ZQR15 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG9M ZQR15 gSSR 84.99 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG9M ZQR15 gSSR 54.80 (cM) Automated name-based View Maps
FIR033 EST_SSR 1.43 Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG9M FIR033 EST_SSR 56.49 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG9 FIR033 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG3Fb FIR033 EST_SSR 29.80 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG9F FIR033 EST_SSR 34.76 (cM) Automated name-based View Maps
PIE259 EST_SSR 9.08 Quercus petraea - Genetic_Qs28xQs21_2009 - LG9F PIE259 EST_SSR 47.96 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG9M PIE259 EST_SSR 42.83 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG9M PIE259 EST_SSR 42.50 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG9M PIE259 EST_SSR 52.59 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG9M PIE259 EST_SSR 43.15 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG9F PIE259 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG9M PIE259 EST_SSR 61.65 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG9F PIE259 EST_SSR 64.14 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG9 PIE259 EST_SSR 10.71 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG8F PIE259 EST_SSR 0.00 (cM) Automated name-based View Maps
PIE251 EST_SSR 30.41 Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG9M PIE251 EST_SSR 26.58 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG9F PIE251 EST_SSR 10.23 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG9M PIE251 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG9M PIE251 EST_SSR 16.08 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG9 PIE251 EST_SSR 29.20 (cM) Automated name-based View Maps
PIE264 EST_SSR 44.79 Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG9M PIE264 EST_SSR 19.41 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG9F PIE264 EST_SSR 40.81 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG9Fa PIE264 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG9 PIE264 EST_SSR 40.22 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG9F PIE264 EST_SSR 21.73 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG9M PIE264 EST_SSR 34.72 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG9M PIE264 EST_SSR 41.85 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG9M PIE264 EST_SSR 25.29 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG9 PIE264 EST_SSR 33.17 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG9M PIE264 EST_SSR 25.50 (cM) Automated name-based View Maps
ZQP15 gSSR 53.00 Castanea sativa - Genetic_BursaxHoppa_2009 - LG9M ZQP15 gSSR 14.83 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG9M ZQP15 gSSR 17.88 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG9F ZQP15 gSSR 23.42 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG9F ZQP15 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG9F ZQP15 gSSR 65.34 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG9Fa ZQP15 gSSR 17.98 (cM) Automated name-based View Maps
Castanea sativa - QTL_BursaxHoppa_2009_Bud_pheno - LG9F ZQP15 gSSR 21.90 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG9M ZQP15 gSSR 13.83 (cM) Automated name-based View Maps
Castanea sativa - QTL_BursaxHoppa_2009_Bud_pheno - LG9M ZQP15 gSSR 21.60 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG9M ZQP15 gSSR 52.06 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG9M ZQP15 gSSR 22.75 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG9M ZQP15 gSSR 52.06 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG9F ZQP15 gSSR 65.34 (cM) Automated name-based View Maps
POR045 EST_SSR 56.03 Quercus robur - Genetic_Robur_Consensus_2011 - LG9 POR045 EST_SSR 48.45 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG9M POR045 EST_SSR 10.31 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG9M POR045 EST_SSR 30.84 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG9 POR045 EST_SSR 26.30 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG9F POR045 EST_SSR 4.10 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG9M POR045 EST_SSR 27.17 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG9Fa POR045 EST_SSR 21.60 (cM) Automated name-based View Maps
FIR037 EST_SSR 62.10 Quercus robur - Genetic_3PxA4_2009 - LG9M FIR037 EST_SSR 64.82 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG9M FIR037 EST_SSR 3.80 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG9F FIR037 EST_SSR 57.52 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG9 FIR037 EST_SSR 59.16 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG9M FIR037 EST_SSR 3.73 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG9M FIR037 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG9M FIR037 EST_SSR 51.95 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG9Fb FIR037 EST_SSR 13.55 (cM) Automated name-based View Maps

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