CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus petraea-Genetic_Qs28xQs21_2011  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG6F
Start
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Magnification
Flipped



 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
EST_SSR
gSSR
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus petraea - Genetic_Qs28xQs21_2011 [ View Map Set Info ]
Map Name: LG6F
Map Start: 0.00 cM
Map Stop: 57.17 cM
Features by Type:
2 gSSR
17 EST_SSR
19 Total

Map Features

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[ Download Feature Correspondence Data ]
Items 1 to 19 of 19.
Quercus petraea - Genetic_Qs28xQs21_2011 - LG6F
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
GOT040 EST_SSR 0.00 Quercus robur - Genetic_3PxA4_2011 - LG6M GOT040 EST_SSR 62.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG6 GOT040 EST_SSR 15.83 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG6F GOT040 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG6M GOT040 EST_SSR 57.65 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG6M GOT040 EST_SSR 5.80 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG6M GOT040 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG6F GOT040 EST_SSR 56.46 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG6 GOT040 EST_SSR 58.09 (cM) Automated name-based View Maps
POR012 EST_SSR 0.98 Quercus petraea - Genetic_Qs28xQs21_2009 - LG6M POR012 EST_SSR 64.86 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG6M POR012 EST_SSR 72.90 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG6F POR012 EST_SSR 1.44 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG6M POR012 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG6 POR012 EST_SSR 19.51 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG6M POR012 EST_SSR 54.79 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG11F POR012 EST_SSR 38.77 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG6F POR012 EST_SSR 53.10 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG6M POR012 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG6 POR012 EST_SSR 62.83 (cM) Automated name-based View Maps
FIR021 EST_SSR 2.76 Quercus robur - Genetic_3PxA4_2011 - LG6F FIR021 EST_SSR 51.51 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG6M FIR021 EST_SSR 71.62 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG11F FIR021 EST_SSR 31.24 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG11M FIR021 EST_SSR 8.21 (cM) Automated name-based View Maps
KQMy50 gSSR 3.40 No other positions
POR024 EST_SSR 13.82 Quercus robur - Genetic_3PxA4_2011 - LG6F POR024 EST_SSR 41.96 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG6F POR024 EST_SSR 43.67 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG6F POR024 EST_SSR 44.42 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG6 POR024 EST_SSR 28.47 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG6M POR024 EST_SSR 29.49 (cM) Automated name-based View Maps
POR021 EST_SSR 14.98 Quercus robur - Genetic_3PxA4_2011 - LG6F POR021 EST_SSR 43.51 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG6M POR021 EST_SSR 43.12 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG6M POR021 EST_SSR 30.92 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG6F POR021 EST_SSR 37.37 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG6 POR021 EST_SSR 44.80 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG6F POR021 EST_SSR 41.97 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG6M POR021 EST_SSR 47.15 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG6M POR021 EST_SSR 16.79 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG6 POR021 EST_SSR 30.36 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG6F POR021 EST_SSR 42.67 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG6F POR021 EST_SSR 20.29 (cM) Automated name-based View Maps
FIR042 EST_SSR 16.46 Quercus petraea - Genetic_Qs28xQs21_2009 - LG6F FIR042 EST_SSR 40.75 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG6M FIR042 EST_SSR 40.58 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG6F FIR042 EST_SSR 16.87 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG6F FIR042 EST_SSR 23.60 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG6 FIR042 EST_SSR 43.01 (cM) Automated name-based View Maps
PIE252 EST_SSR 18.11 Quercus petraea - Genetic_Petraea_Consensus_2011 - LG6 PIE252 EST_SSR 41.15 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG6F PIE252 EST_SSR 38.89 (cM) Automated name-based View Maps
PIE125 EST_SSR 22.58 Quercus petraea - Genetic_Qs28xQs21_2009 - LG6F PIE125 EST_SSR 34.82 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG6F PIE125 EST_SSR 30.35 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG6M PIE125 EST_SSR 38.94 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG6M PIE125 EST_SSR 26.25 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG6M PIE125 EST_SSR 38.53 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG6 PIE125 EST_SSR 37.38 (cM) Automated name-based View Maps
PIE141f EST_SSR 23.69 Quercus petraea - Genetic_Petraea_Consensus_2011 - LG6 PIE141f EST_SSR 34.80 (cM) Automated name-based View Maps
PQRu2 EST_SSR 29.04 Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG6F PQRu2 EST_SSR 28.92 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG6M PQRu2 EST_SSR 40.83 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG6 PQRu2 EST_SSR 28.28 (cM) Automated name-based View Maps
POR037 EST_SSR 29.69 Quercus petraea - Genetic_Qs28xQs21_2011 - LG6M POR037 EST_SSR 46.66 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG6M POR037 EST_SSR 18.64 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG6F POR037 EST_SSR 22.70 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG6F POR037 EST_SSR 37.63 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG6F POR037 EST_SSR 27.35 (cM) Automated name-based View Maps
POR034 EST_SSR 30.86 Quercus robur - Genetic_3PxA4_2011 - LG6M POR034 EST_SSR 24.81 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG6F POR034 EST_SSR 26.29 (cM) Automated name-based View Maps
POR027 EST_SSR 39.54 Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG6M POR027 EST_SSR 52.84 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG6F POR027 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG6 POR027 EST_SSR 63.54 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG6M POR027 EST_SSR 11.12 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG6M POR027 EST_SSR 57.29 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG6F POR027 EST_SSR 48.22 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG6M POR027 EST_SSR 21.13 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG6M POR027 EST_SSR 8.16 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG6M POR027 EST_SSR 10.64 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG6F POR027 EST_SSR 7.90 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG6 POR027 EST_SSR 17.05 (cM) Automated name-based View Maps
ZQP16 gSSR 40.84 Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG6F ZQP16 gSSR 38.38 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG6 ZQP16 gSSR 57.64 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG6M ZQP16 gSSR 45.37 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG6F ZQP16 gSSR 16.03 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG6F ZQP16 gSSR 59.49 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG6F ZQP16 gSSR 16.88 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG6F ZQP16 gSSR 59.49 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG6M ZQP16 gSSR 45.37 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG6 ZQP16 gSSR 15.61 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG6M ZQP16 gSSR 38.01 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG6F ZQP16 gSSR 45.11 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG6M ZQP16 gSSR 10.88 (cM) Automated name-based View Maps
VIT028 EST_SSR 42.04 Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG6F VIT028 EST_SSR 42.34 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG6M VIT028 EST_SSR 7.17 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG6M VIT028 EST_SSR 22.78 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG6M VIT028 EST_SSR 51.09 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG6F VIT028 EST_SSR 18.55 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG6 VIT028 EST_SSR 54.59 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG6F VIT028 EST_SSR 15.14 (cM) Automated name-based View Maps
WAG041 EST_SSR 53.73 Quercus petraea - Genetic_Qs28xQs21_2009 - LG6M WAG041 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG6M WAG041 EST_SSR 63.76 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG6M WAG041 EST_SSR 11.08 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG6M WAG041 EST_SSR 64.59 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG6F WAG041 EST_SSR 3.33 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG6F WAG041 EST_SSR 10.18 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG6 WAG041 EST_SSR 5.57 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG6F WAG041 EST_SSR 40.27 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG1F WAG041 EST_SSR 15.70 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG6F WAG041 EST_SSR 52.37 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG1M WAG041 EST_SSR 39.51 (cM) Automated name-based View Maps
WAG059 EST_SSR 55.12 Quercus petraea - Genetic_Petraea_Consensus_2011 - LG6 WAG059 EST_SSR 3.04 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG6F WAG059 EST_SSR 1.97 (cM) Automated name-based View Maps
PIE066 EST_SSR 57.17 Quercus petraea - Genetic_Qs28xQs21_2009 - LG6F PIE066 EST_SSR 0.00 (cM) Automated name-based View Maps

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