CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus petraea-Genetic_Qs28xQs21_2011  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG9F
Start
Stop
Magnification
Flipped



 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
EST_SSR
gSSR
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus petraea - Genetic_Qs28xQs21_2011 [ View Map Set Info ]
Map Name: LG9F
Map Start: 0.00 cM
Map Stop: 69.52 cM
Features by Type:
1 gSSR
9 EST_SSR
10 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 10 of 10.
Quercus petraea - Genetic_Qs28xQs21_2011 - LG9F
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
FIR026 EST_SSR 0.00 Quercus robur - Genetic_3PxA4_2009 - LG9M FIR026 EST_SSR 72.93 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG9M FIR026 EST_SSR 47.36 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG9 FIR026 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG9 FIR026 EST_SSR 62.24 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG9Fb FIR026 EST_SSR 10.49 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG9F FIR026 EST_SSR 20.53 (cM) Automated name-based View Maps
WAG060 EST_SSR 14.55 Quercus petraea - Genetic_Qs28xQs21_2009 - LG9M WAG060 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG9F WAG060 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG9 WAG060 EST_SSR 8.25 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG9F WAG060 EST_SSR 24.30 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG9Fb WAG060 EST_SSR 7.04 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG9M WAG060 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG9M WAG060 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG9M WAG060 EST_SSR 8.36 (cM) Automated name-based View Maps
FIR045 EST_SSR 17.78 Quercus petraea - Genetic_Qs28xQs21_2009 - LG9F FIR045 EST_SSR 3.28 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG9 FIR045 EST_SSR 66.47 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG9M FIR045 EST_SSR 69.70 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG9M FIR045 EST_SSR 29.85 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG9M FIR045 EST_SSR 6.76 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG9M FIR045 EST_SSR 45.39 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG9M FIR045 EST_SSR 6.69 (cM) Automated name-based View Maps
PIE119 EST_SSR 19.27 Quercus petraea - Genetic_Petraea_Consensus_2011 - LG9 PIE119 EST_SSR 13.91 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG9F PIE119 EST_SSR 4.90 (cM) Automated name-based View Maps
ZQR31 gSSR 21.86 Quercus robur - QTL_3PxA4_2008_Hypoxie - LG9F ZQR31 gSSR 62.40 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG9M ZQR31 gSSR 11.03 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG9F ZQR31 gSSR 36.26 (cM) Automated name-based View Maps
Castanea sativa - QTL_BursaxHoppa_2009_Bud_pheno - LG6F ZQR31 gSSR 30.20 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG9M ZQR31 gSSR 42.68 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG9F ZQR31 gSSR 51.39 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG9M ZQR31 gSSR 8.80 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG9 ZQR31 gSSR 17.24 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG9M ZQR31 gSSR 8.80 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG9F ZQR31 gSSR 62.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG9F ZQR31 gSSR 40.69 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG9M ZQR31 gSSR 8.80 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG9F ZQR31 gSSR 68.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG9M ZQR31 gSSR 17.78 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG9F ZQR31 gSSR 62.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG9Fb ZQR31 gSSR 5.22 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG9M ZQR31 gSSR 8.43 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG9F ZQR31 gSSR 62.40 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG9M ZQR31 gSSR 8.80 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG9F ZQR31 gSSR 15.40 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG9M ZQR31 gSSR 15.70 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG9M ZQR31 gSSR 8.80 (cM) Automated name-based View Maps
Castanea sativa - QTL_BursaxHoppa_2009_Bud_pheno - LG9F ZQR31 gSSR 17.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG9M ZQR31 gSSR 27.88 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG9F ZQR31 gSSR 62.40 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG9F ZQR31 gSSR 62.40 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG9F ZQR31 gSSR 8.20 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG9F ZQR31 gSSR 26.38 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG9M ZQR31 gSSR 8.80 (cM) Automated name-based View Maps
FIR036 EST_SSR 27.23 Quercus robur - Genetic_3PxA4_2011 - LG9M FIR036 EST_SSR 49.24 (cM) Automated name-based View Maps
PIE264 EST_SSR 40.81 Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG9M PIE264 EST_SSR 34.72 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG9M PIE264 EST_SSR 25.29 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG9 PIE264 EST_SSR 40.22 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG9Fa PIE264 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG9M PIE264 EST_SSR 25.50 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG9F PIE264 EST_SSR 21.73 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG9 PIE264 EST_SSR 33.17 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG9M PIE264 EST_SSR 19.41 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG9F PIE264 EST_SSR 44.79 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG9M PIE264 EST_SSR 41.85 (cM) Automated name-based View Maps
PIE059 EST_SSR 55.47 Quercus petraea - Genetic_Qs28xQs21_2009 - LG9F PIE059 EST_SSR 39.48 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG9M PIE059 EST_SSR 29.17 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG9 PIE059 EST_SSR 42.24 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG9 PIE059 EST_SSR 31.15 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG9F PIE059 EST_SSR 11.32 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG9M PIE059 EST_SSR 29.47 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG9F PIE059 EST_SSR 19.90 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG9Fa PIE059 EST_SSR 32.70 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG9M PIE059 EST_SSR 27.67 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG9Fa PIE059 EST_SSR 12.27 (cM) Automated name-based View Maps
PIE259 EST_SSR 64.14 Quercus petraea - Genetic_Qs28xQs21_2009 - LG9M PIE259 EST_SSR 42.50 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG9F PIE259 EST_SSR 9.08 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG9M PIE259 EST_SSR 43.15 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG9M PIE259 EST_SSR 61.65 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG8F PIE259 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG9F PIE259 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG9M PIE259 EST_SSR 42.83 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG9 PIE259 EST_SSR 10.71 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG9M PIE259 EST_SSR 52.59 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG9F PIE259 EST_SSR 47.96 (cM) Automated name-based View Maps
GOT067 EST_SSR 69.52 Castanea sativa - Genetic_BursaxHoppa_2009 - LG9F GOT067 EST_SSR 39.89 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG9M GOT067 EST_SSR 54.90 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG3Fb GOT067 EST_SSR 12.14 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG9 GOT067 EST_SSR 59.92 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG9F GOT067 EST_SSR 53.62 (cM) Automated name-based View Maps

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