CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus petraea-Genetic_Qs28xQs21_2011  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG12F
Start
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Magnification
Flipped



 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
EST_SSR
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus petraea - Genetic_Qs28xQs21_2011 [ View Map Set Info ]
Map Name: LG12F
Map Start: 0.00 cM
Map Stop: 30.25 cM
Features by Type:
10 EST_SSR
10 Total

Map Features

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[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 10 of 10.
Quercus petraea - Genetic_Qs28xQs21_2011 - LG12F
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
GOT009 EST_SSR 0.00 Quercus robur - Genetic_Robur_Consensus_2011 - LG1 GOT009 EST_SSR 53.08 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG1F GOT009 EST_SSR 33.17 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG12M GOT009 EST_SSR 3.63 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG12 GOT009 EST_SSR 3.66 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG12M GOT009 EST_SSR 18.58 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG1M GOT009 EST_SSR 11.47 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG12 GOT009 EST_SSR 2.56 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG1M GOT009 EST_SSR 32.56 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG1 GOT009 EST_SSR 7.33 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG12M GOT009 EST_SSR 40.13 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG12M GOT009 EST_SSR 4.19 (cM) Automated name-based View Maps
PIE215 EST_SSR 6.94 Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG12F PIE215 EST_SSR 61.77 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG12F PIE215 EST_SSR 39.17 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG12 PIE215 EST_SSR 11.17 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG12F PIE215 EST_SSR 22.71 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG12F PIE215 EST_SSR 25.27 (cM) Automated name-based View Maps
VIT010 EST_SSR 9.59 Quercus petraea - Genetic_Qs28xQs21_2009 - LG12F VIT010 EST_SSR 20.40 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG12F VIT010 EST_SSR 59.78 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG12 VIT010 EST_SSR 14.75 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG12M VIT010 EST_SSR 35.99 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG12 VIT010 EST_SSR 9.45 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG12M VIT010 EST_SSR 34.48 (cM) Automated name-based View Maps
FIR008 EST_SSR 11.93 Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG12M FIR008 EST_SSR 34.04 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG12M FIR008 EST_SSR 11.25 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG12F FIR008 EST_SSR 55.89 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG12F FIR008 EST_SSR 40.83 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG12M FIR008 EST_SSR 32.61 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG12 FIR008 EST_SSR 13.04 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG12F FIR008 EST_SSR 17.86 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG12F FIR008 EST_SSR 51.80 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG12F FIR008 EST_SSR 12.67 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG12 FIR008 EST_SSR 17.02 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG12F FIR008 EST_SSR 33.96 (cM) Automated name-based View Maps
PIE126 EST_SSR 13.45 Quercus robur - Genetic_3PxA4_2011 - LG12M PIE126 EST_SSR 17.52 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG12F PIE126 EST_SSR 23.49 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG12F PIE126 EST_SSR 16.27 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG12 PIE126 EST_SSR 19.15 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG12 PIE126 EST_SSR 15.61 (cM) Automated name-based View Maps
PIE113 EST_SSR 18.98 Quercus petraea - Genetic_Petraea_Consensus_2011 - LG12 PIE113 EST_SSR 22.93 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG12M PIE113 EST_SSR 20.55 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG12M PIE113 EST_SSR 20.49 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG12F PIE113 EST_SSR 10.57 (cM) Automated name-based View Maps
GOT032 EST_SSR 20.16 Quercus robur - Genetic_Robur_Consensus_2011 - LG12 GOT032 EST_SSR 24.87 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG12M GOT032 EST_SSR 25.53 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG12 GOT032 EST_SSR 24.28 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG12M GOT032 EST_SSR 28.27 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG12F GOT032 EST_SSR 26.32 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG12F GOT032 EST_SSR 31.99 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG12F GOT032 EST_SSR 36.58 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG12F GOT032 EST_SSR 22.44 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG12M GOT032 EST_SSR 7.66 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG12F GOT032 EST_SSR 9.14 (cM) Automated name-based View Maps
VIT037 EST_SSR 25.51 Quercus petraea - Genetic_Petraea_Consensus_2011 - LG12 VIT037 EST_SSR 28.32 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG12F VIT037 EST_SSR 4.48 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG12F VIT037 EST_SSR 29.66 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG12M VIT037 EST_SSR 18.06 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG12M VIT037 EST_SSR 21.62 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG12M VIT037 EST_SSR 24.11 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG12M VIT037 EST_SSR 18.07 (cM) Automated name-based View Maps
WAG047 EST_SSR 26.89 Quercus petraea - Genetic_Petraea_Consensus_2011 - LG12 WAG047 EST_SSR 30.18 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG12M WAG047 EST_SSR 35.18 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG12F WAG047 EST_SSR 8.51 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG12M WAG047 EST_SSR 34.37 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG12F WAG047 EST_SSR 45.17 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG5F WAG047 EST_SSR 22.74 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG5 WAG047 EST_SSR 51.04 (cM) Automated name-based View Maps
GOT005 EST_SSR 30.25 Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG9Fa GOT005 EST_SSR 51.79 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG12F GOT005 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG12 GOT005 EST_SSR 33.22 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG9M GOT005 EST_SSR 73.18 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG9F GOT005 EST_SSR 36.72 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG9 GOT005 EST_SSR 70.60 (cM) Automated name-based View Maps

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