CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



Save link

* Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link.


General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus robur-Genetic_x3P_2015  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG4
Start
Stop
Magnification
Flipped



 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus robur - Genetic_x3P_2015 [ View Map Set Info ]
Map Name: LG4
Map Start: 0.00 cM
Map Stop: 57.15 cM
Features by Type:
61 SNP
61 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 61.       of 3 | Next
Quercus robur - Genetic_x3P_2015 - LG4
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
s_1DY96Q_819 SNP 0.00 Quercus robur - Genetic_x11P2_2015 - LG4 s_1DY96Q_819 SNP 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG4 s_1DY96Q_819 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1DY96Q_819 SNP 0.00 (cM) Automated name-based View Maps
s_1CCJPV_1444 SNP 0.93 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1CCJPV_1444 SNP 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG4 s_1CCJPV_1444 SNP 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG4 s_1CCJPV_1444 SNP 0.00 (cM) Automated name-based View Maps
s_1B54MC_944 SNP 0.93 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1B54MC_944 SNP 1.20 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG4 s_1B54MC_944 SNP 0.88 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG4 s_1B54MC_944 SNP 0.56 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG4 s_1B54MC_944 SNP 0.00 (cM) Automated name-based View Maps
s_1AEUAK_82 SNP 1.85 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1AEUAK_82 SNP 1.50 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG4 s_1AEUAK_82 SNP 0.56 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG4 s_1AEUAK_82 SNP 0.88 (cM) Automated name-based View Maps
v_10353_86 SNP 2.16 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 v_10353_86 SNP 2.10 (cM) Automated name-based View Maps
v_10208_216 SNP 2.47 Quercus robur - Genetic_x11P2_2015 - LG4 v_10208_216 SNP 2.63 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 v_10208_216 SNP 2.50 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG4 v_10208_216 SNP 1.68 (cM) Automated name-based View Maps
s_2F7OY9_468 SNP 3.09 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_2F7OY9_468 SNP 3.20 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG4 s_2F7OY9_468 SNP 3.51 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG4 s_2F7OY9_468 SNP 5.62 (cM) Automated name-based View Maps
s_2F1GB0_316 SNP 3.09 Quercus petraea - Genetic_Qs28m_2015 - LG4 s_2F1GB0_316 SNP 5.62 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_2F1GB0_316 SNP 3.20 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG4 s_2F1GB0_316 SNP 3.51 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG4 s_2F1GB0_316 SNP 6.52 (cM) Automated name-based View Maps
s_1B9VS_247 SNP 5.25 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1B9VS_247 SNP 5.20 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG4 s_1B9VS_247 SNP 6.29 (cM) Automated name-based View Maps
s_1AGTRR_422 SNP 7.10 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1AGTRR_422 SNP 7.30 (cM) Automated name-based View Maps
s_1DGCGG_507 SNP 8.34 Quercus robur - Genetic_x11P2_2015 - LG4 s_1DGCGG_507 SNP 6.14 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG4 s_1DGCGG_507 SNP 7.30 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1DGCGG_507 SNP 7.60 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG4 s_1DGCGG_507 SNP 7.02 (cM) Automated name-based View Maps
v_3309_159 SNP 8.34 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 v_3309_159 SNP 8.50 (cM) Automated name-based View Maps
s_1A8PHD_860 SNP 8.34 Quercus petraea - Genetic_Qs21_2015 - LG4 s_1A8PHD_860 SNP 11.15 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG4 s_1A8PHD_860 SNP 8.43 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG4 s_1A8PHD_860 SNP 7.90 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1A8PHD_860 SNP 8.50 (cM) Automated name-based View Maps
s_2FWRZI_737 SNP 8.64 Quercus petraea - Genetic_Qs29_2015 - LG4 s_2FWRZI_737 SNP 7.90 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_2FWRZI_737 SNP 8.50 (cM) Automated name-based View Maps
s_2F6DKZ_348 SNP 10.19 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_2F6DKZ_348 SNP 10.50 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG4 s_2F6DKZ_348 SNP 9.55 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG4 s_2F6DKZ_348 SNP 13.15 (cM) Automated name-based View Maps
s_1B40AL_845 SNP 10.81 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1B40AL_845 SNP 11.10 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG4 s_1B40AL_845 SNP 13.72 (cM) Automated name-based View Maps
s_1BPTED_1109 SNP 13.90 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1BPTED_1109 SNP 15.40 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG4 s_1BPTED_1109 SNP 21.40 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG4 s_1BPTED_1109 SNP 24.88 (cM) Automated name-based View Maps
s_1BMW48_788 SNP 14.51 Quercus robur - Genetic_x11P1_2015 - LG4 s_1BMW48_788 SNP 13.49 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG4 s_1BMW48_788 SNP 15.80 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1BMW48_788 SNP 15.40 (cM) Automated name-based View Maps
s_2G3F3G_919 SNP 14.51 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_2G3F3G_919 SNP 16.40 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG4 s_2G3F3G_919 SNP 26.02 (cM) Automated name-based View Maps
s_1A1PEC_1268 SNP 15.13 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1A1PEC_1268 SNP 18.40 (cM) Automated name-based View Maps
s_AE02FHHEG_597 SNP 15.44 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_AE02FHHEG_597 SNP 18.70 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG4 s_AE02FHHEG_597 SNP 22.53 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG4 s_AE02FHHEG_597 SNP 22.84 (cM) Automated name-based View Maps
s_1AMF36_828 SNP 20.08 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1AMF36_828 SNP 23.40 (cM) Automated name-based View Maps
s_1ARJU8_947 SNP 20.70 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1ARJU8_947 SNP 26.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG4 s_1ARJU8_947 SNP 24.79 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG4 s_1ARJU8_947 SNP 27.23 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG4 s_1ARJU8_947 SNP 29.18 (cM) Automated name-based View Maps
s_2GTZQY_877 SNP 22.55 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_2GTZQY_877 SNP 28.40 (cM) Automated name-based View Maps
s_1B0PR8_1153 SNP 24.71 Quercus petraea - Genetic_Qs29_2015 - LG4 s_1B0PR8_1153 SNP 33.37 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1B0PR8_1153 SNP 31.80 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG4 s_1B0PR8_1153 SNP 37.84 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG4 s_1B0PR8_1153 SNP 41.48 (cM) Automated name-based View Maps

CMap Contact

Evoltree    BioGeCo    INRA    logo_ff    logo_gmod