CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Quercus robur-Genetic_x3P_2015  (Reference Set)
Min. Correspondence
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Maps LG7
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Magnification
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 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus robur - Genetic_x3P_2015 [ View Map Set Info ]
Map Name: LG7
Map Start: 0.00 cM
Map Stop: 50.02 cM
Features by Type:
106 SNP
106 Total

Map Features

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Items 1 to 25 of 106.       of 5 | Next
Quercus robur - Genetic_x3P_2015 - LG7
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
v_987_503 SNP 23.46 Quercus robur - Genetic_x11P2_2015 - LG7 v_987_503 SNP 35.98 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 v_987_503 SNP 29.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG7 v_987_503 SNP 34.30 (cM) Automated name-based View Maps
s_1A0V83_194 SNP 0.00 Quercus robur - Genetic_x11P2_2015 - LG7 s_1A0V83_194 SNP 0.88 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG7 s_1A0V83_194 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG7 s_1A0V83_194 SNP 0.56 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1A0V83_194 SNP 0.90 (cM) Automated name-based View Maps
s_1A1W90_1264 SNP 0.00 Quercus petraea - Genetic_Qs21_2015 - LG7 s_1A1W90_1264 SNP 0.29 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1A1W90_1264 SNP 0.90 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG7 s_1A1W90_1264 SNP 0.88 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG7 s_1A1W90_1264 SNP 0.56 (cM) Automated name-based View Maps
s_1AEPN8_195 SNP 0.00 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1AEPN8_195 SNP 2.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG7 s_1AEPN8_195 SNP 1.69 (cM) Automated name-based View Maps
v_12101_526 SNP 0.00 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 v_12101_526 SNP 2.30 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG7 v_12101_526 SNP 0.00 (cM) Automated name-based View Maps
s_1DUHWL_492 SNP 1.85 Quercus robur - Genetic_x11P2_2015 - LG7 s_1DUHWL_492 SNP 1.75 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1DUHWL_492 SNP 4.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG7 s_1DUHWL_492 SNP 5.63 (cM) Automated name-based View Maps
s_1CZDDV_115 SNP 2.78 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1CZDDV_115 SNP 5.30 (cM) Automated name-based View Maps
s_2JFYMM_943 SNP 3.40 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_2JFYMM_943 SNP 6.00 (cM) Automated name-based View Maps
s_1A4LQ5_200 SNP 3.40 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1A4LQ5_200 SNP 6.00 (cM) Automated name-based View Maps
v_12078_258 SNP 3.40 Quercus petraea - Genetic_Qs28m_2015 - LG7 v_12078_258 SNP 3.37 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG7 v_12078_258 SNP 3.51 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG7 v_12078_258 SNP 6.75 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 v_12078_258 SNP 6.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG7 v_12078_258 SNP 2.57 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG7 v_12078_258 SNP 6.58 (cM) Automated name-based View Maps
s_AE01CUW3X_1102 SNP 3.70 Quercus petraea - Genetic_Qs21_2015 - LG7 s_AE01CUW3X_1102 SNP 8.01 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_AE01CUW3X_1102 SNP 7.20 (cM) Automated name-based View Maps
s_1A1IAQ_1449 SNP 4.01 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1A1IAQ_1449 SNP 8.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG7 s_1A1IAQ_1449 SNP 4.57 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG7 s_1A1IAQ_1449 SNP 5.62 (cM) Automated name-based View Maps
s_2HCYWO_875 SNP 5.87 Quercus petraea - Genetic_Qs28f_2015 - LG7 s_2HCYWO_875 SNP 8.87 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG7 s_2HCYWO_875 SNP 7.90 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_2HCYWO_875 SNP 9.70 (cM) Automated name-based View Maps
s_1A4JZ4_682 SNP 6.48 Quercus petraea - Genetic_Qs28m_2015 - LG7 s_1A4JZ4_682 SNP 7.30 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1A4JZ4_682 SNP 10.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG7 s_1A4JZ4_682 SNP 9.44 (cM) Automated name-based View Maps
s_1A1V8U_566 SNP 7.41 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1A1V8U_566 SNP 11.40 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG7 s_1A1V8U_566 SNP 11.15 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG7 s_1A1V8U_566 SNP 9.66 (cM) Automated name-based View Maps
v_13992_283 SNP 7.72 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 v_13992_283 SNP 11.60 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG7 v_13992_283 SNP 12.30 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG7 v_13992_283 SNP 9.66 (cM) Automated name-based View Maps
s_1A6NJX_49 SNP 8.03 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1A6NJX_49 SNP 11.60 (cM) Automated name-based View Maps
v_4582_229 SNP 8.34 Quercus petraea - Genetic_Qs29_2015 - LG7 v_4582_229 SNP 9.65 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 v_4582_229 SNP 11.60 (cM) Automated name-based View Maps
s_1BFKP_401 SNP 8.95 Quercus robur - Genetic_x11P1_2015 - LG7 s_1BFKP_401 SNP 11.81 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1BFKP_401 SNP 12.30 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG7 s_1BFKP_401 SNP 9.66 (cM) Automated name-based View Maps
s_1ANHYV_910 SNP 9.88 Quercus robur - Genetic_x11P2_2015 - LG7 s_1ANHYV_910 SNP 9.66 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1ANHYV_910 SNP 13.10 (cM) Automated name-based View Maps
s_1A00T7_2485 SNP 9.88 Quercus petraea - Genetic_Qs28f_2015 - LG7 s_1A00T7_2485 SNP 14.87 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1A00T7_2485 SNP 13.20 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG7 s_1A00T7_2485 SNP 10.12 (cM) Automated name-based View Maps
v_12096_116 SNP 10.19 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 v_12096_116 SNP 13.50 (cM) Automated name-based View Maps
s_1B5NAS_823 SNP 10.50 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1B5NAS_823 SNP 13.80 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG7 s_1B5NAS_823 SNP 15.44 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG7 s_1B5NAS_823 SNP 14.62 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG7 s_1B5NAS_823 SNP 10.53 (cM) Automated name-based View Maps
s_1A05ID_866 SNP 11.42 Quercus petraea - Genetic_Qs28f_2015 - LG7 s_1A05ID_866 SNP 16.59 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG7 s_1A05ID_866 SNP 11.24 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1A05ID_866 SNP 14.90 (cM) Automated name-based View Maps
s_1AKOX1_362 SNP 12.35 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1AKOX1_362 SNP 15.80 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG7 s_1AKOX1_362 SNP 17.44 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG7 s_1AKOX1_362 SNP 12.29 (cM) Automated name-based View Maps

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