CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



Save link

* Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link.


General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus robur-Genetic_x3P_2015  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG8
Start
Stop
Magnification
Flipped



 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus robur - Genetic_x3P_2015 [ View Map Set Info ]
Map Name: LG8
Map Start: 0.00 cM
Map Stop: 60.22 cM
Features by Type:
127 SNP
127 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 127.       of 6 | Next
Quercus robur - Genetic_x3P_2015 - LG8
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
s_1A9STZ_1334 SNP 0.00 Quercus petraea - Genetic_Qs28m_2015 - LG8 s_1A9STZ_1334 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1A9STZ_1334 SNP 2.70 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG8 s_1A9STZ_1334 SNP 0.00 (cM) Automated name-based View Maps
s_1A0PF4_181 SNP 0.00 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1A0PF4_181 SNP 2.70 (cM) Automated name-based View Maps
s_1B42XL_1085 SNP 0.31 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1B42XL_1085 SNP 2.70 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG8 s_1B42XL_1085 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG8 s_1B42XL_1085 SNP 0.00 (cM) Automated name-based View Maps
s_AE01CHF9N_1577 SNP 1.54 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_AE01CHF9N_1577 SNP 4.20 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG8 s_AE01CHF9N_1577 SNP 2.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG8 s_AE01CHF9N_1577 SNP 3.51 (cM) Automated name-based View Maps
s_1BIGJD_1518 SNP 1.54 Quercus robur - Genetic_x11P2_2015 - LG8 s_1BIGJD_1518 SNP 3.51 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG8 s_1BIGJD_1518 SNP 1.12 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1BIGJD_1518 SNP 4.20 (cM) Automated name-based View Maps
s_1AEXZQ_163 SNP 1.54 Quercus petraea - Genetic_Qs28f_2015 - LG8 s_1AEXZQ_163 SNP 2.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG8 s_1AEXZQ_163 SNP 3.51 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1AEXZQ_163 SNP 4.20 (cM) Automated name-based View Maps
s_AE02HBBZC_489 SNP 1.85 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_AE02HBBZC_489 SNP 4.60 (cM) Automated name-based View Maps
s_1A5A4Q_171 SNP 2.16 Quercus petraea - Genetic_Qs21_2015 - LG8 s_1A5A4Q_171 SNP 4.86 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1A5A4Q_171 SNP 4.90 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG8 s_1A5A4Q_171 SNP 2.81 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG8 s_1A5A4Q_171 SNP 3.51 (cM) Automated name-based View Maps
v_15131_444 SNP 2.47 Quercus petraea - Genetic_Qs21_2015 - LG8 v_15131_444 SNP 5.72 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG8 v_15131_444 SNP 4.32 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 v_15131_444 SNP 5.20 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG8 v_15131_444 SNP 3.37 (cM) Automated name-based View Maps
s_1ATUFS_623 SNP 2.78 Quercus robur - Genetic_x11P2_2015 - LG8 s_1ATUFS_623 SNP 3.51 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG8 s_1ATUFS_623 SNP 3.37 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG8 s_1ATUFS_623 SNP 6.29 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1ATUFS_623 SNP 5.50 (cM) Automated name-based View Maps
s_AE01DPC2S_801 SNP 3.09 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_AE01DPC2S_801 SNP 5.80 (cM) Automated name-based View Maps
s_1A3S95_980 SNP 3.40 Quercus petraea - Genetic_Qs21_2015 - LG8 s_1A3S95_980 SNP 8.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1A3S95_980 SNP 6.10 (cM) Automated name-based View Maps
s_1BKZKZ_791 SNP 3.40 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1BKZKZ_791 SNP 6.10 (cM) Automated name-based View Maps
s_A70M2_378 SNP 3.40 Quercus petraea - Genetic_Qs28m_2015 - LG8 s_A70M2_378 SNP 2.81 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG8 s_A70M2_378 SNP 6.86 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_A70M2_378 SNP 6.10 (cM) Automated name-based View Maps
v_11857_126 SNP 3.70 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 v_11857_126 SNP 6.70 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG8 v_11857_126 SNP 3.93 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG8 v_11857_126 SNP 3.37 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG8 v_11857_126 SNP 5.26 (cM) Automated name-based View Maps
s_2FWLR9_741 SNP 4.32 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_2FWLR9_741 SNP 7.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG8 s_2FWLR9_741 SNP 3.93 (cM) Automated name-based View Maps
s_1A90X5_1269 SNP 5.25 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1A90X5_1269 SNP 8.80 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG8 s_1A90X5_1269 SNP 5.26 (cM) Automated name-based View Maps
s_1ARZ4L_577 SNP 5.25 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1ARZ4L_577 SNP 8.80 (cM) Automated name-based View Maps
v_12086_250 SNP 5.87 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 v_12086_250 SNP 9.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG8 v_12086_250 SNP 6.18 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG8 v_12086_250 SNP 5.26 (cM) Automated name-based View Maps
v_12984_540 SNP 5.87 Quercus robur - Genetic_x11P1_2015 - LG8 v_12984_540 SNP 6.18 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG8 v_12984_540 SNP 5.26 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG8 v_12984_540 SNP 10.19 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 v_12984_540 SNP 9.40 (cM) Automated name-based View Maps
s_1AK41C_1165 SNP 6.48 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1AK41C_1165 SNP 10.00 (cM) Automated name-based View Maps
s_1BNT0R_1367 SNP 9.88 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1BNT0R_1367 SNP 15.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG8 s_1BNT0R_1367 SNP 10.86 (cM) Automated name-based View Maps
v_5216_201 SNP 9.88 Quercus robur - Genetic_x11P1_2015 - LG8 v_5216_201 SNP 10.12 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG8 v_5216_201 SNP 18.03 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 v_5216_201 SNP 15.30 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG8 v_5216_201 SNP 11.42 (cM) Automated name-based View Maps
v_11812_123 SNP 10.19 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 v_11812_123 SNP 16.40 (cM) Automated name-based View Maps
s_1B0WSB_975 SNP 13.28 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1B0WSB_975 SNP 19.50 (cM) Automated name-based View Maps

CMap Contact

Evoltree    BioGeCo    INRA    logo_ff    logo_gmod