CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



Save link

* Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link.


General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus robur-Genetic_x3P_2015  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG9
Start
Stop
Magnification
Flipped



 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus robur - Genetic_x3P_2015 [ View Map Set Info ]
Map Name: LG9
Map Start: 0.00 cM
Map Stop: 55.29 cM
Features by Type:
72 SNP
72 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 72.       of 3 | Next
Quercus robur - Genetic_x3P_2015 - LG9
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
s_2F1PMY_384 SNP 0.00 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_2F1PMY_384 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG9 s_2F1PMY_384 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG9 s_2F1PMY_384 SNP 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG9 s_2F1PMY_384 SNP 0.00 (cM) Automated name-based View Maps
s_1EDNWY_103 SNP 0.00 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1EDNWY_103 SNP 0.00 (cM) Automated name-based View Maps
s_1A7LD7_894 SNP 0.31 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1A7LD7_894 SNP 0.30 (cM) Automated name-based View Maps
s_1C1GRV_1289 SNP 0.93 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1C1GRV_1289 SNP 0.90 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG9 s_1C1GRV_1289 SNP 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG9 s_1C1GRV_1289 SNP 0.00 (cM) Automated name-based View Maps
s_1A6EDZ_1597 SNP 1.24 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1A6EDZ_1597 SNP 0.90 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG9 s_1A6EDZ_1597 SNP 0.00 (cM) Automated name-based View Maps
s_1DNJ9J_1006 SNP 3.40 Quercus robur - Genetic_x11P2_2015 - LG9 s_1DNJ9J_1006 SNP 0.88 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG9 s_1DNJ9J_1006 SNP 1.69 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1DNJ9J_1006 SNP 1.70 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG9 s_1DNJ9J_1006 SNP 3.43 (cM) Automated name-based View Maps
s_1B0S44_444 SNP 3.40 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1B0S44_444 SNP 1.90 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG2 s_1B0S44_444 SNP 3.51 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1B0S44_444 SNP 1.70 (cM) Automated name-based View Maps
s_1AUOYU_390 SNP 4.94 Quercus robur - Genetic_x11P1_2015 - LG9 s_1AUOYU_390 SNP 2.25 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1AUOYU_390 SNP 2.10 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG9 s_1AUOYU_390 SNP 0.88 (cM) Automated name-based View Maps
s_2F0SQ3_1625 SNP 6.48 Quercus petraea - Genetic_Qs28m_2015 - LG9 s_2F0SQ3_1625 SNP 1.12 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_2F0SQ3_1625 SNP 2.10 (cM) Automated name-based View Maps
s_2JHD8L_1003 SNP 6.48 Quercus robur - Genetic_x11P1_2015 - LG9 s_2JHD8L_1003 SNP 3.37 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_2JHD8L_1003 SNP 3.20 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG9 s_2JHD8L_1003 SNP 3.43 (cM) Automated name-based View Maps
s_1D293I_504 SNP 6.48 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1D293I_504 SNP 3.70 (cM) Automated name-based View Maps
v_7237_179 SNP 6.48 Quercus petraea - Genetic_Qs28f_2015 - LG9 v_7237_179 SNP 2.57 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 v_7237_179 SNP 3.70 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG9 v_7237_179 SNP 2.81 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG9 v_7237_179 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG9 v_7237_179 SNP 4.94 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG9 v_7237_179 SNP 2.63 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG9 v_7237_179 SNP 5.62 (cM) Automated name-based View Maps
s_1AOZNJ_343 SNP 6.48 Quercus robur - Genetic_x11P1_2015 - LG9 s_1AOZNJ_343 SNP 5.62 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1AOZNJ_343 SNP 4.10 (cM) Automated name-based View Maps
s_1BONE7_428 SNP 8.34 Quercus robur - Genetic_x11P2_2015 - LG9 s_1BONE7_428 SNP 2.63 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG9 s_1BONE7_428 SNP 3.43 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1BONE7_428 SNP 4.60 (cM) Automated name-based View Maps
s_1CF300_256 SNP 8.34 Quercus robur - Genetic_x11P2_2015 - LG9 s_1CF300_256 SNP 2.63 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1CF300_256 SNP 4.60 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG9 s_1CF300_256 SNP 3.43 (cM) Automated name-based View Maps
s_1AKBB0_560 SNP 9.57 Quercus robur - Genetic_x11P2_2015 - LG9 s_1AKBB0_560 SNP 2.63 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1AKBB0_560 SNP 4.60 (cM) Automated name-based View Maps
s_1B1WY6_565 SNP 10.19 Quercus robur - Genetic_x11P1_2015 - LG9 s_1B1WY6_565 SNP 9.55 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1B1WY6_565 SNP 6.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG9 s_1B1WY6_565 SNP 6.14 (cM) Automated name-based View Maps
s_1A1KJH_1864 SNP 11.12 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1A1KJH_1864 SNP 6.70 (cM) Automated name-based View Maps
s_1B743A_851 SNP 11.12 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1B743A_851 SNP 6.70 (cM) Automated name-based View Maps
s_1BRU9X_1309 SNP 12.35 Quercus robur - Genetic_x11P1_2015 - LG9 s_1BRU9X_1309 SNP 9.55 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG9 s_1BRU9X_1309 SNP 5.14 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG9 s_1BRU9X_1309 SNP 7.02 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1BRU9X_1309 SNP 6.70 (cM) Automated name-based View Maps
s_1CB7D_971 SNP 12.35 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1CB7D_971 SNP 7.90 (cM) Automated name-based View Maps
s_1A0033_1103 SNP 16.06 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1A0033_1103 SNP 11.60 (cM) Automated name-based View Maps
s_2F8Y4J_695 SNP 17.30 Quercus robur - Genetic_x11P2_2015 - LG9 s_2F8Y4J_695 SNP 12.29 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_2F8Y4J_695 SNP 12.90 (cM) Automated name-based View Maps
s_1B6FJW_487 SNP 17.60 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1B6FJW_487 SNP 14.60 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG9 s_1B6FJW_487 SNP 12.00 (cM) Automated name-based View Maps
s_1C25WK_634 SNP 17.60 Quercus robur - Genetic_x11P1_2015 - LG9 s_1C25WK_634 SNP 17.98 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG9 s_1C25WK_634 SNP 14.04 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1C25WK_634 SNP 14.60 (cM) Automated name-based View Maps

CMap Contact

Evoltree    BioGeCo    INRA    logo_ff    logo_gmod