CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus robur-Genetic_x3P_2015  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG11
Start
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Magnification
Flipped



 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus robur - Genetic_x3P_2015 [ View Map Set Info ]
Map Name: LG11
Map Start: 0.00 cM
Map Stop: 49.10 cM
Features by Type:
78 SNP
78 Total

Map Features

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Items 1 to 25 of 78.       of 4 | Next
Quercus robur - Genetic_x3P_2015 - LG11
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
v_1962_125 SNP 0.00 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 v_1962_125 SNP 0.90 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG11 v_1962_125 SNP 0.00 (cM) Automated name-based View Maps
v_6423_343 SNP 0.00 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 v_6423_343 SNP 1.20 (cM) Automated name-based View Maps
v_14239_147 SNP 0.31 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 v_14239_147 SNP 1.50 (cM) Automated name-based View Maps
v_828_328 SNP 1.24 Quercus robur - Genetic_A4_2015 - LG11 v_828_328 SNP 2.47 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 v_828_328 SNP 2.50 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG11 v_828_328 SNP 3.93 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG11 v_828_328 SNP 3.51 (cM) Automated name-based View Maps
v_7306_139 SNP 1.24 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 v_7306_139 SNP 2.50 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG11 v_7306_139 SNP 3.43 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG11 v_7306_139 SNP 3.37 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG11 v_7306_139 SNP 3.51 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG11 v_7306_139 SNP 0.57 (cM) Automated name-based View Maps
s_1B4ZU7_136 SNP 1.85 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 s_1B4ZU7_136 SNP 3.10 (cM) Automated name-based View Maps
s_1A21LQ_890 SNP 3.40 Quercus petraea - Genetic_Qs28f_2015 - LG11 s_1A21LQ_890 SNP 6.29 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 s_1A21LQ_890 SNP 4.50 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG11 s_1A21LQ_890 SNP 0.00 (cM) Automated name-based View Maps
s_1A7B2G_412 SNP 3.70 Quercus petraea - Genetic_Qs28m_2015 - LG11 s_1A7B2G_412 SNP 0.56 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG11 s_1A7B2G_412 SNP 8.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 s_1A7B2G_412 SNP 5.10 (cM) Automated name-based View Maps
s_1AE786_852 SNP 5.25 Quercus petraea - Genetic_Qs28m_2015 - LG11 s_1AE786_852 SNP 1.68 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 s_1AE786_852 SNP 6.20 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG11 s_1AE786_852 SNP 8.86 (cM) Automated name-based View Maps
s_1A0DWG_290 SNP 6.79 Quercus robur - Genetic_x11P1_2015 - LG11 s_1A0DWG_290 SNP 6.74 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG11 s_1A0DWG_290 SNP 8.77 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 s_1A0DWG_290 SNP 6.50 (cM) Automated name-based View Maps
s_1AHMM4_1672 SNP 6.79 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 s_1AHMM4_1672 SNP 6.50 (cM) Automated name-based View Maps
v_10643_171 SNP 8.03 Quercus petraea - Genetic_Qs28m_2015 - LG11 v_10643_171 SNP 5.62 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 v_10643_171 SNP 7.70 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG11 v_10643_171 SNP 10.57 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG11 v_10643_171 SNP 9.65 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG11 v_10643_171 SNP 7.87 (cM) Automated name-based View Maps
s_1AK4KW_542 SNP 8.03 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 s_1AK4KW_542 SNP 7.70 (cM) Automated name-based View Maps
s_2FRNMA_428 SNP 8.64 Quercus robur - Genetic_x11P1_2015 - LG11 s_2FRNMA_428 SNP 7.87 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 s_2FRNMA_428 SNP 8.30 (cM) Automated name-based View Maps
s_1B016R_769 SNP 8.64 Quercus robur - Genetic_x11P1_2015 - LG11 s_1B016R_769 SNP 7.87 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 s_1B016R_769 SNP 8.30 (cM) Automated name-based View Maps
s_1A0318_352 SNP 9.57 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 s_1A0318_352 SNP 8.60 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG11 s_1A0318_352 SNP 13.15 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG11 s_1A0318_352 SNP 10.53 (cM) Automated name-based View Maps
s_1A2SCB_364 SNP 9.57 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 s_1A2SCB_364 SNP 8.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG11 s_1A2SCB_364 SNP 10.53 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG11 s_1A2SCB_364 SNP 13.15 (cM) Automated name-based View Maps
s_1ASU9F_372 SNP 9.57 Quercus petraea - Genetic_Qs29_2015 - LG11 s_1ASU9F_372 SNP 2.63 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 s_1ASU9F_372 SNP 10.50 (cM) Automated name-based View Maps
s_AE02GTRJB_516 SNP 10.80 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 s_AE02GTRJB_516 SNP 10.50 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG11 s_AE02GTRJB_516 SNP 11.24 (cM) Automated name-based View Maps
s_1APGJ9_1546 SNP 11.11 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 s_1APGJ9_1546 SNP 10.80 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG11 s_1APGJ9_1546 SNP 11.24 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG11 s_1APGJ9_1546 SNP 14.04 (cM) Automated name-based View Maps
v_4345_1148 SNP 12.66 Quercus robur - Genetic_x11P2_2015 - LG11 v_4345_1148 SNP 16.67 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG11 v_4345_1148 SNP 18.30 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 v_4345_1148 SNP 12.30 (cM) Automated name-based View Maps
s_1AGLHH_589 SNP 12.66 Quercus petraea - Genetic_Qs28m_2015 - LG11 s_1AGLHH_589 SNP 14.64 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG11 s_1AGLHH_589 SNP 18.30 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 s_1AGLHH_589 SNP 12.30 (cM) Automated name-based View Maps
s_1AHLK5_1014 SNP 12.97 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 s_1AHLK5_1014 SNP 12.30 (cM) Automated name-based View Maps
s_1AIGVD_1288 SNP 12.97 Quercus petraea - Genetic_Qs21_2015 - LG11 s_1AIGVD_1288 SNP 12.01 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 s_1AIGVD_1288 SNP 12.30 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG11 s_1AIGVD_1288 SNP 13.49 (cM) Automated name-based View Maps
s_1D2VI_403 SNP 12.97 Quercus robur - Genetic_x11P1_2015 - LG11 s_1D2VI_403 SNP 12.93 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG11 s_1D2VI_403 SNP 18.30 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG11 s_1D2VI_403 SNP 17.55 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG11 s_1D2VI_403 SNP 12.30 (cM) Automated name-based View Maps

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