CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



Save link

* Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link.


General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus robur-Genetic_A4_2015  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG2
Start
Stop
Magnification
Flipped



 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus robur - Genetic_A4_2015 [ View Map Set Info ]
Map Name: LG2
Map Start: 0.00 cM
Map Stop: 100.66 cM
Features by Type:
179 SNP
179 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 179.       of 8 | Next
Quercus robur - Genetic_A4_2015 - LG2
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
s_1A9VEF_1737 SNP 0.00 Quercus robur - Genetic_x11P2_2015 - LG2 s_1A9VEF_1737 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1A9VEF_1737 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG2 s_1A9VEF_1737 SNP 0.00 (cM) Automated name-based View Maps
s_1A7A5_1484 SNP 0.00 Quercus robur - Genetic_x3P_2015 - LG2 s_1A7A5_1484 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG2 s_1A7A5_1484 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1A7A5_1484 SNP 0.60 (cM) Automated name-based View Maps
s_1B5MB_806 SNP 0.93 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1B5MB_806 SNP 0.70 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG2 s_1B5MB_806 SNP 0.00 (cM) Automated name-based View Maps
s_2GFRR5_365 SNP 0.93 Quercus petraea - Genetic_Qs29_2015 - LG2 s_2GFRR5_365 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_2GFRR5_365 SNP 1.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG2 s_2GFRR5_365 SNP 0.00 (cM) Automated name-based View Maps
s_1ATR24_545 SNP 1.24 Quercus robur - Genetic_x11P2_2015 - LG2 s_1ATR24_545 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1ATR24_545 SNP 1.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG2 s_1ATR24_545 SNP 0.00 (cM) Automated name-based View Maps
s_1DPB90_173 SNP 1.24 Quercus petraea - Genetic_Qs28m_2015 - LG2 s_1DPB90_173 SNP 2.25 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1DPB90_173 SNP 1.20 (cM) Automated name-based View Maps
s_1AEVRR_401 SNP 1.24 Quercus petraea - Genetic_Qs29_2015 - LG2 s_1AEVRR_401 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1AEVRR_401 SNP 1.20 (cM) Automated name-based View Maps
s_1A48U1_307 SNP 1.85 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1A48U1_307 SNP 1.90 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG2 s_1A48U1_307 SNP 0.86 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG2 s_1A48U1_307 SNP 2.63 (cM) Automated name-based View Maps
s_1A4BEL_1084 SNP 1.85 Quercus robur - Genetic_x11P1_2015 - LG2 s_1A4BEL_1084 SNP 0.56 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG2 s_1A4BEL_1084 SNP 2.63 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1A4BEL_1084 SNP 1.90 (cM) Automated name-based View Maps
s_1B37A9_1096 SNP 1.85 Quercus petraea - Genetic_Qs29_2015 - LG2 s_1B37A9_1096 SNP 0.88 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1B37A9_1096 SNP 2.00 (cM) Automated name-based View Maps
v_49_504 SNP 3.09 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 v_49_504 SNP 3.60 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG2 v_49_504 SNP 1.75 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG2 v_49_504 SNP 6.14 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG2 v_49_504 SNP 6.18 (cM) Automated name-based View Maps
s_1CDH09_311 SNP 3.40 Quercus petraea - Genetic_Qs28f_2015 - LG2 s_1CDH09_311 SNP 2.57 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG2 s_1CDH09_311 SNP 6.14 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1CDH09_311 SNP 3.60 (cM) Automated name-based View Maps
s_1A18DI_793 SNP 4.01 Quercus petraea - Genetic_Qs28f_2015 - LG2 s_1A18DI_793 SNP 4.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG2 s_1A18DI_793 SNP 7.30 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG2 s_1A18DI_793 SNP 1.75 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1A18DI_793 SNP 4.70 (cM) Automated name-based View Maps
s_2HO70E_1069 SNP 4.63 Quercus robur - Genetic_x11P2_2015 - LG2 s_2HO70E_1069 SNP 7.90 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_2HO70E_1069 SNP 4.80 (cM) Automated name-based View Maps
s_1BUHBA_1720 SNP 5.56 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1BUHBA_1720 SNP 6.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG2 s_1BUHBA_1720 SNP 5.06 (cM) Automated name-based View Maps
v_11876_273 SNP 6.48 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 v_11876_273 SNP 6.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG2 v_11876_273 SNP 5.87 (cM) Automated name-based View Maps
s_1AHZS8_1359 SNP 6.48 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1AHZS8_1359 SNP 6.60 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG2 s_1AHZS8_1359 SNP 7.71 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG2 s_1AHZS8_1359 SNP 8.43 (cM) Automated name-based View Maps
s_1D73CN_1209 SNP 6.48 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1D73CN_1209 SNP 6.60 (cM) Automated name-based View Maps
s_1B243_541 SNP 7.41 Quercus petraea - Genetic_Qs29_2015 - LG2 s_1B243_541 SNP 4.39 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1B243_541 SNP 7.60 (cM) Automated name-based View Maps
s_1AD54R_1446 SNP 7.41 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1AD54R_1446 SNP 7.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG2 s_1AD54R_1446 SNP 11.41 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG2 s_1AD54R_1446 SNP 6.00 (cM) Automated name-based View Maps
s_1A5RWX_1735 SNP 8.33 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1A5RWX_1735 SNP 8.50 (cM) Automated name-based View Maps
s_1A2P1Q_570 SNP 9.57 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1A2P1Q_570 SNP 9.70 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG2 s_1A2P1Q_570 SNP 10.11 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG2 s_1A2P1Q_570 SNP 7.90 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG2 s_1A2P1Q_570 SNP 7.14 (cM) Automated name-based View Maps
s_1A1XZR_162 SNP 9.57 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1A1XZR_162 SNP 9.70 (cM) Automated name-based View Maps
v_10117_337 SNP 10.49 Quercus robur - Genetic_x3P_2015 - LG2 v_10117_337 SNP 9.57 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG2 v_10117_337 SNP 7.14 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 v_10117_337 SNP 10.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG2 v_10117_337 SNP 10.11 (cM) Automated name-based View Maps
s_1BBVI4_367 SNP 11.11 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1BBVI4_367 SNP 11.20 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG2 s_1BBVI4_367 SNP 7.43 (cM) Automated name-based View Maps

CMap Contact

Evoltree    BioGeCo    INRA    logo_ff    logo_gmod