CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus robur-Genetic_A4_2015  (Reference Set)
Min. Correspondence
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Maps LG3
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Magnification
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 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus robur - Genetic_A4_2015 [ View Map Set Info ]
Map Name: LG3
Map Start: 0.00 cM
Map Stop: 60.23 cM
Features by Type:
81 SNP
81 Total

Map Features

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Items 1 to 25 of 81.       of 4 | Next
Quercus robur - Genetic_A4_2015 - LG3
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
v_7974_341 SNP 0.00 Quercus petraea - Genetic_Qs28m_2015 - LG3 v_7974_341 SNP 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG3 v_7974_341 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 v_7974_341 SNP 3.30 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG3 v_7974_341 SNP 0.00 (cM) Automated name-based View Maps
s_1AP4NA_371 SNP 0.00 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1AP4NA_371 SNP 3.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG3 s_1AP4NA_371 SNP 0.00 (cM) Automated name-based View Maps
s_1AVH2D_583 SNP 1.24 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1AVH2D_583 SNP 4.60 (cM) Automated name-based View Maps
s_1CHP3O_651 SNP 1.85 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1CHP3O_651 SNP 4.60 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG3 s_1CHP3O_651 SNP 0.88 (cM) Automated name-based View Maps
v_12310_201 SNP 2.78 Quercus petraea - Genetic_Qs28m_2015 - LG3 v_12310_201 SNP 2.81 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG3 v_12310_201 SNP 6.15 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 v_12310_201 SNP 6.20 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG3 v_12310_201 SNP 1.75 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG3 v_12310_201 SNP 1.12 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG3 v_12310_201 SNP 2.29 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG3 v_12310_201 SNP 2.29 (cM) Automated name-based View Maps
s_1A4L7L_341 SNP 3.70 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1A4L7L_341 SNP 7.30 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG3 s_1A4L7L_341 SNP 3.94 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG3 s_1A4L7L_341 SNP 3.14 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG3 s_1A4L7L_341 SNP 4.63 (cM) Automated name-based View Maps
s_1A0VYH_629 SNP 3.70 Quercus petraea - Genetic_Qs28f_2015 - LG3 s_1A0VYH_629 SNP 3.43 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1A0VYH_629 SNP 7.30 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG3 s_1A0VYH_629 SNP 3.94 (cM) Automated name-based View Maps
s_1BKV5S_414 SNP 5.25 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1BKV5S_414 SNP 9.70 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG3 s_1BKV5S_414 SNP 5.06 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG3 s_1BKV5S_414 SNP 10.54 (cM) Automated name-based View Maps
v_3772_305 SNP 5.25 Quercus petraea - Genetic_Qs21_2015 - LG3 v_3772_305 SNP 7.43 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG3 v_3772_305 SNP 10.54 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 v_3772_305 SNP 10.30 (cM) Automated name-based View Maps
s_1AEKN6_868 SNP 7.41 Quercus petraea - Genetic_Qs28f_2015 - LG3 s_1AEKN6_868 SNP 8.29 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1AEKN6_868 SNP 12.50 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG3 s_1AEKN6_868 SNP 7.87 (cM) Automated name-based View Maps
s_1AO61N_474 SNP 7.41 Quercus petraea - Genetic_Qs28m_2015 - LG3 s_1AO61N_474 SNP 7.87 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG3 s_1AO61N_474 SNP 8.29 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1AO61N_474 SNP 12.50 (cM) Automated name-based View Maps
s_1BY7RW_1224 SNP 7.41 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1BY7RW_1224 SNP 12.50 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG3 s_1BY7RW_1224 SNP 7.87 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG3 s_1BY7RW_1224 SNP 8.29 (cM) Automated name-based View Maps
s_1A267R_1478 SNP 7.72 Quercus petraea - Genetic_Qs28m_2015 - LG3 s_1A267R_1478 SNP 8.99 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG3 s_1A267R_1478 SNP 8.86 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1A267R_1478 SNP 12.80 (cM) Automated name-based View Maps
s_2HC6X3_131 SNP 7.72 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_2HC6X3_131 SNP 12.80 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG3 s_2HC6X3_131 SNP 8.78 (cM) Automated name-based View Maps
v_80_100 SNP 7.72 Quercus petraea - Genetic_Qs29_2015 - LG3 v_80_100 SNP 13.18 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 v_80_100 SNP 12.80 (cM) Automated name-based View Maps
s_1A0L23_135 SNP 7.72 Quercus petraea - Genetic_Qs21_2015 - LG3 s_1A0L23_135 SNP 11.72 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1A0L23_135 SNP 12.80 (cM) Automated name-based View Maps
s_1AJCQW_2638 SNP 8.34 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1AJCQW_2638 SNP 13.40 (cM) Automated name-based View Maps
s_1A55U_323 SNP 10.81 Quercus robur - Genetic_x11P1_2015 - LG3 s_1A55U_323 SNP 5.62 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1A55U_323 SNP 15.90 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG3 s_1A55U_323 SNP 11.43 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG3 s_1A55U_323 SNP 9.65 (cM) Automated name-based View Maps
s_1ANM1Q_1603 SNP 10.81 Quercus petraea - Genetic_Qs28m_2015 - LG3 s_1ANM1Q_1603 SNP 12.93 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG3 s_1ANM1Q_1603 SNP 11.43 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG3 s_1ANM1Q_1603 SNP 21.96 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1ANM1Q_1603 SNP 15.90 (cM) Automated name-based View Maps
s_1AUGX9_741 SNP 10.81 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1AUGX9_741 SNP 15.90 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG3 s_1AUGX9_741 SNP 10.53 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG3 s_1AUGX9_741 SNP 5.62 (cM) Automated name-based View Maps
s_1C7F17_1509 SNP 11.12 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1C7F17_1509 SNP 16.20 (cM) Automated name-based View Maps
s_1AR9NG_204 SNP 11.12 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1AR9NG_204 SNP 16.20 (cM) Automated name-based View Maps
v_12179_170 SNP 11.73 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 v_12179_170 SNP 16.80 (cM) Automated name-based View Maps
s_1AENZ3_173 SNP 11.73 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1AENZ3_173 SNP 16.80 (cM) Automated name-based View Maps
v_8155_160 SNP 12.04 Quercus petraea - Genetic_Qs28f_2015 - LG3 v_8155_160 SNP 13.15 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG3 v_8155_160 SNP 14.62 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 v_8155_160 SNP 17.50 (cM) Automated name-based View Maps

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