CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Quercus robur-Genetic_A4_2015  (Reference Set)
Min. Correspondence
Align Vertically
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Maps LG7
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Magnification
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 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus robur - Genetic_A4_2015 [ View Map Set Info ]
Map Name: LG7
Map Start: 0.00 cM
Map Stop: 57.76 cM
Features by Type:
79 SNP
79 Total

Map Features

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Items 1 to 25 of 79.       of 4 | Next
Quercus robur - Genetic_A4_2015 - LG7
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
s_1B0GT0_1302 SNP 0.00 Quercus petraea - Genetic_Qs28f_2015 - LG7 s_1B0GT0_1302 SNP 0.86 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG7 s_1B0GT0_1302 SNP 1.69 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1B0GT0_1302 SNP 4.30 (cM) Automated name-based View Maps
s_1B8FLD_1048 SNP 0.93 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1B8FLD_1048 SNP 6.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG7 s_1B8FLD_1048 SNP 3.51 (cM) Automated name-based View Maps
s_1AJPAW_315 SNP 0.93 Quercus robur - Genetic_x11P1_2015 - LG7 s_1AJPAW_315 SNP 6.75 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG7 s_1AJPAW_315 SNP 3.51 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1AJPAW_315 SNP 6.00 (cM) Automated name-based View Maps
s_1A97I_1090 SNP 3.40 Quercus robur - Genetic_x11P2_2015 - LG7 s_1A97I_1090 SNP 7.90 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1A97I_1090 SNP 9.70 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG7 s_1A97I_1090 SNP 9.15 (cM) Automated name-based View Maps
s_1A0RLL_1215 SNP 5.25 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1A0RLL_1215 SNP 10.50 (cM) Automated name-based View Maps
s_1C1ML7_371 SNP 6.49 Quercus robur - Genetic_x11P2_2015 - LG7 s_1C1ML7_371 SNP 9.66 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1C1ML7_371 SNP 11.80 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG7 s_1C1ML7_371 SNP 12.58 (cM) Automated name-based View Maps
s_1A7AIU_637 SNP 6.49 Quercus petraea - Genetic_Qs28f_2015 - LG7 s_1A7AIU_637 SNP 12.58 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1A7AIU_637 SNP 11.80 (cM) Automated name-based View Maps
s_2HO83N_250 SNP 6.79 Quercus petraea - Genetic_Qs28m_2015 - LG7 s_2HO83N_250 SNP 8.99 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_2HO83N_250 SNP 12.10 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG7 s_2HO83N_250 SNP 14.30 (cM) Automated name-based View Maps
s_1AR9VW_972 SNP 8.03 Quercus petraea - Genetic_Qs28f_2015 - LG7 s_1AR9VW_972 SNP 14.30 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1AR9VW_972 SNP 12.80 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG7 s_1AR9VW_972 SNP 9.66 (cM) Automated name-based View Maps
s_1A5QJC_1165 SNP 8.64 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1A5QJC_1165 SNP 13.40 (cM) Automated name-based View Maps
s_AE01D5P8K_293 SNP 8.64 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_AE01D5P8K_293 SNP 13.80 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG7 s_AE01D5P8K_293 SNP 13.16 (cM) Automated name-based View Maps
s_1C6PVZ_251 SNP 10.19 Quercus robur - Genetic_x11P2_2015 - LG7 s_1C6PVZ_251 SNP 11.41 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1C6PVZ_251 SNP 15.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG7 s_1C6PVZ_251 SNP 14.92 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG7 s_1C6PVZ_251 SNP 16.59 (cM) Automated name-based View Maps
s_1A8TK5_500 SNP 10.19 Quercus petraea - Genetic_Qs29_2015 - LG7 s_1A8TK5_500 SNP 14.92 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG7 s_1A8TK5_500 SNP 16.31 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG7 s_1A8TK5_500 SNP 11.41 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG7 s_1A8TK5_500 SNP 17.17 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1A8TK5_500 SNP 15.00 (cM) Automated name-based View Maps
s_1B75OR_370 SNP 10.81 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1B75OR_370 SNP 15.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG7 s_1B75OR_370 SNP 12.29 (cM) Automated name-based View Maps
s_1A06BR_1398 SNP 10.81 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1A06BR_1398 SNP 15.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG7 s_1A06BR_1398 SNP 12.29 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG7 s_1A06BR_1398 SNP 16.31 (cM) Automated name-based View Maps
s_1C20HH_735 SNP 11.73 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1C20HH_735 SNP 15.60 (cM) Automated name-based View Maps
s_1A8HQ5_784 SNP 11.73 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1A8HQ5_784 SNP 15.60 (cM) Automated name-based View Maps
v_4126_174 SNP 15.13 Quercus robur - Genetic_x11P2_2015 - LG7 v_4126_174 SNP 19.31 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 v_4126_174 SNP 19.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG7 v_4126_174 SNP 21.75 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG7 v_4126_174 SNP 19.12 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG7 v_4126_174 SNP 13.58 (cM) Automated name-based View Maps
s_1BCPPY_330 SNP 16.37 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1BCPPY_330 SNP 20.20 (cM) Automated name-based View Maps
s_1A5187_473 SNP 16.68 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1A5187_473 SNP 20.50 (cM) Automated name-based View Maps
s_1BRSKO_1036 SNP 19.15 Quercus petraea - Genetic_Qs28m_2015 - LG7 s_1BRSKO_1036 SNP 16.30 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1BRSKO_1036 SNP 21.40 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG7 s_1BRSKO_1036 SNP 23.76 (cM) Automated name-based View Maps
s_1AEQ6X_511 SNP 19.15 Quercus robur - Genetic_x11P2_2015 - LG7 s_1AEQ6X_511 SNP 21.94 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG7 s_1AEQ6X_511 SNP 24.87 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1AEQ6X_511 SNP 21.80 (cM) Automated name-based View Maps
s_1AI909_182 SNP 19.77 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1AI909_182 SNP 22.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG7 s_1AI909_182 SNP 23.05 (cM) Automated name-based View Maps
s_1A7BHR_1032 SNP 20.69 Quercus petraea - Genetic_Qs21_2015 - LG7 s_1A7BHR_1032 SNP 26.33 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1A7BHR_1032 SNP 23.30 (cM) Automated name-based View Maps
s_2F74F0_606 SNP 21.00 Quercus petraea - Genetic_Qs28f_2015 - LG7 s_2F74F0_606 SNP 25.73 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG7 s_2F74F0_606 SNP 19.11 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_2F74F0_606 SNP 23.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG7 s_2F74F0_606 SNP 25.45 (cM) Automated name-based View Maps

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