CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Quercus robur-Genetic_A4_2015  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG8
Start
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Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus robur - Genetic_A4_2015 [ View Map Set Info ]
Map Name: LG8
Map Start: 0.00 cM
Map Stop: 67.00 cM
Features by Type:
113 SNP
113 Total

Map Features

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Items 1 to 25 of 113.       of 5 | Next
Quercus robur - Genetic_A4_2015 - LG8
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
s_1A5JU2_890 SNP 0.00 Quercus petraea - Genetic_Qs21_2015 - LG8 s_1A5JU2_890 SNP 0.86 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1A5JU2_890 SNP 0.10 (cM) Automated name-based View Maps
s_2H2SBE_749 SNP 1.54 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_2H2SBE_749 SNP 2.70 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG8 s_2H2SBE_749 SNP 3.51 (cM) Automated name-based View Maps
s_1A4BE3_203 SNP 1.85 Quercus petraea - Genetic_Qs29_2015 - LG8 s_1A4BE3_203 SNP 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG8 s_1A4BE3_203 SNP 3.43 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1A4BE3_203 SNP 2.70 (cM) Automated name-based View Maps
s_1BU08Z_593 SNP 2.47 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1BU08Z_593 SNP 3.30 (cM) Automated name-based View Maps
s_1BI3YZ_478 SNP 2.47 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1BI3YZ_478 SNP 3.60 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG8 s_1BI3YZ_478 SNP 2.25 (cM) Automated name-based View Maps
v_15131_444 SNP 4.32 Quercus petraea - Genetic_Qs21_2015 - LG8 v_15131_444 SNP 5.72 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 v_15131_444 SNP 5.20 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG8 v_15131_444 SNP 2.47 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG8 v_15131_444 SNP 3.37 (cM) Automated name-based View Maps
s_1AP5P7_985 SNP 5.25 Quercus robur - Genetic_x11P1_2015 - LG8 s_1AP5P7_985 SNP 3.37 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1AP5P7_985 SNP 5.80 (cM) Automated name-based View Maps
v_2573_40 SNP 5.56 Quercus petraea - Genetic_Qs21_2015 - LG8 v_2573_40 SNP 8.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG8 v_2573_40 SNP 7.02 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 v_2573_40 SNP 6.10 (cM) Automated name-based View Maps
s_A6LVO_403 SNP 5.56 Quercus petraea - Genetic_Qs28m_2015 - LG8 s_A6LVO_403 SNP 2.81 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG8 s_A6LVO_403 SNP 7.02 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_A6LVO_403 SNP 6.10 (cM) Automated name-based View Maps
s_1A90KD_521 SNP 5.87 Quercus robur - Genetic_x11P1_2015 - LG8 s_1A90KD_521 SNP 3.37 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1A90KD_521 SNP 6.10 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG8 s_1A90KD_521 SNP 3.51 (cM) Automated name-based View Maps
s_1D5BJQ_1147 SNP 5.87 Quercus robur - Genetic_x11P2_2015 - LG8 s_1D5BJQ_1147 SNP 3.51 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG8 s_1D5BJQ_1147 SNP 6.86 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG8 s_1D5BJQ_1147 SNP 2.81 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1D5BJQ_1147 SNP 6.10 (cM) Automated name-based View Maps
s_1EJJN8_790 SNP 6.17 Quercus robur - Genetic_x11P1_2015 - LG8 s_1EJJN8_790 SNP 3.93 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1EJJN8_790 SNP 6.40 (cM) Automated name-based View Maps
v_12073_585 SNP 6.17 Quercus petraea - Genetic_Qs29_2015 - LG8 v_12073_585 SNP 8.78 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG8 v_12073_585 SNP 8.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 v_12073_585 SNP 6.40 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG8 v_12073_585 SNP 3.37 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG8 v_12073_585 SNP 3.93 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG8 v_12073_585 SNP 6.86 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG8 v_12073_585 SNP 3.51 (cM) Automated name-based View Maps
s_1CL5RR_430 SNP 6.79 Quercus robur - Genetic_x11P1_2015 - LG8 s_1CL5RR_430 SNP 3.93 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG8 s_1CL5RR_430 SNP 5.26 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1CL5RR_430 SNP 6.70 (cM) Automated name-based View Maps
s_1BIU5W_953 SNP 7.10 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1BIU5W_953 SNP 6.70 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG8 s_1BIU5W_953 SNP 7.14 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG8 s_1BIU5W_953 SNP 3.37 (cM) Automated name-based View Maps
s_2GAGAJ_1750 SNP 8.95 Quercus robur - Genetic_x11P2_2015 - LG8 s_2GAGAJ_1750 SNP 5.26 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_2GAGAJ_1750 SNP 8.80 (cM) Automated name-based View Maps
v_12984_540 SNP 10.19 Quercus robur - Genetic_x11P2_2015 - LG8 v_12984_540 SNP 5.26 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 v_12984_540 SNP 9.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG8 v_12984_540 SNP 6.18 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG8 v_12984_540 SNP 5.87 (cM) Automated name-based View Maps
s_1C92A7_899 SNP 10.19 Quercus robur - Genetic_x11P1_2015 - LG8 s_1C92A7_899 SNP 6.18 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1C92A7_899 SNP 9.80 (cM) Automated name-based View Maps
s_1AIYB_349 SNP 10.19 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1AIYB_349 SNP 9.80 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG8 s_1AIYB_349 SNP 12.01 (cM) Automated name-based View Maps
s_1A13QG_1021 SNP 13.90 Quercus petraea - Genetic_Qs28f_2015 - LG8 s_1A13QG_1021 SNP 10.57 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1A13QG_1021 SNP 13.50 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG8 s_1A13QG_1021 SNP 10.73 (cM) Automated name-based View Maps
s_2G4DJ8_177 SNP 15.75 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_2G4DJ8_177 SNP 15.30 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG8 s_2G4DJ8_177 SNP 10.68 (cM) Automated name-based View Maps
s_1AXZWN_1306 SNP 16.37 Quercus petraea - Genetic_Qs29_2015 - LG8 s_1AXZWN_1306 SNP 15.83 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1AXZWN_1306 SNP 15.30 (cM) Automated name-based View Maps
s_1C5YXP_743 SNP 16.37 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1C5YXP_743 SNP 15.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG8 s_1C5YXP_743 SNP 10.68 (cM) Automated name-based View Maps
s_1A3IBR_240 SNP 16.37 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1A3IBR_240 SNP 15.90 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG8 s_1A3IBR_240 SNP 11.42 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG8 s_1A3IBR_240 SNP 11.43 (cM) Automated name-based View Maps
s_1BN2OD_551 SNP 16.99 Quercus robur - Genetic_x11P1_2015 - LG8 s_1BN2OD_551 SNP 11.24 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG8 s_1BN2OD_551 SNP 12.29 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1BN2OD_551 SNP 16.40 (cM) Automated name-based View Maps

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