CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Quercus robur-Genetic_A4_2015  (Reference Set)
Min. Correspondence
Align Vertically
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Maps LG10
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Magnification
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 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus robur - Genetic_A4_2015 [ View Map Set Info ]
Map Name: LG10
Map Start: 0.00 cM
Map Stop: 58.06 cM
Features by Type:
82 SNP
82 Total

Map Features

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Items 1 to 25 of 82.       of 4 | Next
Quercus robur - Genetic_A4_2015 - LG10
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
s_1APHBW_422 SNP 0.00 Quercus petraea - Genetic_Qs28f_2015 - LG10 s_1APHBW_422 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1APHBW_422 SNP 0.00 (cM) Automated name-based View Maps
s_1DID0F_368 SNP 0.93 Quercus robur - Genetic_x11P1_2015 - LG10 s_1DID0F_368 SNP 0.56 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1DID0F_368 SNP 0.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG10 s_1DID0F_368 SNP 0.00 (cM) Automated name-based View Maps
s_1D2IQZ_2217 SNP 0.62 Quercus robur - Genetic_x11P2_2015 - LG10 s_1D2IQZ_2217 SNP 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG10 s_1D2IQZ_2217 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1D2IQZ_2217 SNP 0.60 (cM) Automated name-based View Maps
s_1CEHG2_1135 SNP 0.93 Quercus petraea - Genetic_Qs29_2015 - LG10 s_1CEHG2_1135 SNP 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG10 s_1CEHG2_1135 SNP 0.56 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG10 s_1CEHG2_1135 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1CEHG2_1135 SNP 0.60 (cM) Automated name-based View Maps
s_1A17QG_1669 SNP 1.24 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1A17QG_1669 SNP 0.90 (cM) Automated name-based View Maps
s_1BO83W_1238 SNP 1.85 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1BO83W_1238 SNP 0.90 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG10 s_1BO83W_1238 SNP 0.00 (cM) Automated name-based View Maps
s_1AF1T8_626 SNP 1.24 Quercus petraea - Genetic_Qs21_2015 - LG10 s_1AF1T8_626 SNP 0.29 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG10 s_1AF1T8_626 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG10 s_1AF1T8_626 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG10 s_1AF1T8_626 SNP 1.69 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1AF1T8_626 SNP 0.90 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG10 s_1AF1T8_626 SNP 0.00 (cM) Automated name-based View Maps
s_1AI7TR_497 SNP 3.40 Quercus robur - Genetic_x11P1_2015 - LG10 s_1AI7TR_497 SNP 2.25 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG10 s_1AI7TR_497 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1AI7TR_497 SNP 1.80 (cM) Automated name-based View Maps
s_1AL45E_1261 SNP 3.40 Quercus petraea - Genetic_Qs28m_2015 - LG10 s_1AL45E_1261 SNP 3.93 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG10 s_1AL45E_1261 SNP 4.39 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1AL45E_1261 SNP 3.80 (cM) Automated name-based View Maps
s_1C9YH8_246 SNP 4.01 Quercus petraea - Genetic_Qs28f_2015 - LG10 s_1C9YH8_246 SNP 4.86 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1C9YH8_246 SNP 4.90 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG10 s_1C9YH8_246 SNP 4.39 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG10 s_1C9YH8_246 SNP 5.06 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG10 s_1C9YH8_246 SNP 3.14 (cM) Automated name-based View Maps
s_1AMIWB_921 SNP 4.01 Quercus petraea - Genetic_Qs28m_2015 - LG10 s_1AMIWB_921 SNP 5.06 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1AMIWB_921 SNP 5.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG10 s_1AMIWB_921 SNP 4.86 (cM) Automated name-based View Maps
s_1DZUCE_584 SNP 4.01 Quercus petraea - Genetic_Qs28f_2015 - LG10 s_1DZUCE_584 SNP 5.15 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG10 s_1DZUCE_584 SNP 3.51 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1DZUCE_584 SNP 5.30 (cM) Automated name-based View Maps
s_1A1M3H_1148 SNP 4.63 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1A1M3H_1148 SNP 5.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG10 s_1A1M3H_1148 SNP 3.51 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG10 s_1A1M3H_1148 SNP 5.15 (cM) Automated name-based View Maps
s_1DGW0E_407 SNP 4.94 Quercus petraea - Genetic_Qs28m_2015 - LG10 s_1DGW0E_407 SNP 6.18 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG10 s_1DGW0E_407 SNP 5.43 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1DGW0E_407 SNP 6.00 (cM) Automated name-based View Maps
s_1B6YNI_505 SNP 5.25 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1B6YNI_505 SNP 6.50 (cM) Automated name-based View Maps
s_1A0T7I_639 SNP 5.87 Quercus robur - Genetic_x11P1_2015 - LG10 s_1A0T7I_639 SNP 7.87 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG10 s_1A0T7I_639 SNP 4.39 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1A0T7I_639 SNP 7.10 (cM) Automated name-based View Maps
s_1A2ESQ_1270 SNP 5.87 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1A2ESQ_1270 SNP 7.10 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG10 s_1A2ESQ_1270 SNP 7.72 (cM) Automated name-based View Maps
s_1BGA8Z_252 SNP 5.87 Quercus petraea - Genetic_Qs28f_2015 - LG10 s_1BGA8Z_252 SNP 7.44 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG10 s_1BGA8Z_252 SNP 4.39 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1BGA8Z_252 SNP 7.10 (cM) Automated name-based View Maps
v_11502_167 SNP 5.87 Quercus petraea - Genetic_Qs28f_2015 - LG10 v_11502_167 SNP 7.15 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 v_11502_167 SNP 7.10 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG10 v_11502_167 SNP 7.87 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG10 v_11502_167 SNP 8.34 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG10 v_11502_167 SNP 4.39 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG10 v_11502_167 SNP 6.18 (cM) Automated name-based View Maps
s_1A46KY_1625 SNP 8.65 Quercus robur - Genetic_x11P2_2015 - LG10 s_1A46KY_1625 SNP 5.27 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG10 s_1A46KY_1625 SNP 10.12 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG10 s_1A46KY_1625 SNP 8.60 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1A46KY_1625 SNP 9.40 (cM) Automated name-based View Maps
s_1A3TAQ_458 SNP 8.65 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1A3TAQ_458 SNP 9.90 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG10 s_1A3TAQ_458 SNP 8.43 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG10 s_1A3TAQ_458 SNP 10.58 (cM) Automated name-based View Maps
v_15000_157 SNP 11.43 Quercus robur - Genetic_x11P2_2015 - LG10 v_15000_157 SNP 9.66 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG10 v_15000_157 SNP 10.02 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 v_15000_157 SNP 11.80 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG10 v_15000_157 SNP 11.24 (cM) Automated name-based View Maps
s_1A6FDU_492 SNP 12.66 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1A6FDU_492 SNP 12.70 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG10 s_1A6FDU_492 SNP 10.88 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG10 s_1A6FDU_492 SNP 11.80 (cM) Automated name-based View Maps
s_1BPGGE_362 SNP 12.97 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1BPGGE_362 SNP 13.00 (cM) Automated name-based View Maps
s_1BB4ZY_910 SNP 12.97 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1BB4ZY_910 SNP 13.00 (cM) Automated name-based View Maps

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