CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus petraea-Genetic_Qs21_2015  (Reference Set)
Min. Correspondence
Align Vertically
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Maps LG10
Start
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Magnification
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 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus petraea - Genetic_Qs21_2015 [ View Map Set Info ]
Map Name: LG10
Map Start: 0.00 cM
Map Stop: 62.38 cM
Features by Type:
65 SNP
65 Total

Map Features

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Items 1 to 25 of 65.       of 3 | Next
Quercus petraea - Genetic_Qs21_2015 - LG10
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
v_3903_108 SNP 57.24 Quercus robur - Genetic_x3P_2015 - LG10 v_3903_108 SNP 46.64 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 v_3903_108 SNP 51.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG10 v_3903_108 SNP 53.43 (cM) Automated name-based View Maps
s_1AJ2TD_828 SNP 0.00 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1AJ2TD_828 SNP 0.00 (cM) Automated name-based View Maps
v_13197_167 SNP 0.00 Quercus robur - Genetic_x11P2_2015 - LG10 v_13197_167 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG10 v_13197_167 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG10 v_13197_167 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 v_13197_167 SNP 0.60 (cM) Automated name-based View Maps
s_1AF1T8_626 SNP 0.29 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1AF1T8_626 SNP 0.90 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG10 s_1AF1T8_626 SNP 1.69 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG10 s_1AF1T8_626 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG10 s_1AF1T8_626 SNP 1.24 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG10 s_1AF1T8_626 SNP 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG10 s_1AF1T8_626 SNP 0.00 (cM) Automated name-based View Maps
s_AP7PO_499 SNP 2.57 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_AP7PO_499 SNP 2.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG10 s_AP7PO_499 SNP 3.37 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG10 s_AP7PO_499 SNP 0.00 (cM) Automated name-based View Maps
s_1A6CK6_610 SNP 2.57 Quercus petraea - Genetic_Qs29_2015 - LG10 s_1A6CK6_610 SNP 4.39 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1A6CK6_610 SNP 3.20 (cM) Automated name-based View Maps
s_1B1YZY_447 SNP 3.14 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1B1YZY_447 SNP 3.80 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG10 s_1B1YZY_447 SNP 3.40 (cM) Automated name-based View Maps
s_1BTCU5_1260 SNP 3.14 Quercus petraea - Genetic_Qs29_2015 - LG10 s_1BTCU5_1260 SNP 4.39 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG10 s_1BTCU5_1260 SNP 3.40 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1BTCU5_1260 SNP 3.80 (cM) Automated name-based View Maps
s_1CGYZD_301 SNP 3.14 Quercus robur - Genetic_x11P2_2015 - LG10 s_1CGYZD_301 SNP 2.63 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG10 s_1CGYZD_301 SNP 4.50 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1CGYZD_301 SNP 3.80 (cM) Automated name-based View Maps
s_1C9YH8_246 SNP 3.14 Quercus robur - Genetic_A4_2015 - LG10 s_1C9YH8_246 SNP 4.01 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG10 s_1C9YH8_246 SNP 4.86 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG10 s_1C9YH8_246 SNP 5.06 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1C9YH8_246 SNP 4.90 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG10 s_1C9YH8_246 SNP 4.39 (cM) Automated name-based View Maps
s_1A46KY_1625 SNP 8.60 Quercus robur - Genetic_x11P1_2015 - LG10 s_1A46KY_1625 SNP 10.12 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1A46KY_1625 SNP 9.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG10 s_1A46KY_1625 SNP 8.65 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG10 s_1A46KY_1625 SNP 5.27 (cM) Automated name-based View Maps
s_1BE2N0_291 SNP 8.60 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1BE2N0_291 SNP 9.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG10 s_1BE2N0_291 SNP 10.12 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG10 s_1BE2N0_291 SNP 5.27 (cM) Automated name-based View Maps
s_1A426E_820 SNP 8.88 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1A426E_820 SNP 10.70 (cM) Automated name-based View Maps
v_15000_157 SNP 10.02 Quercus robur - Genetic_A4_2015 - LG10 v_15000_157 SNP 11.43 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG10 v_15000_157 SNP 11.24 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG10 v_15000_157 SNP 9.66 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 v_15000_157 SNP 11.80 (cM) Automated name-based View Maps
s_1A6FDU_492 SNP 10.88 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1A6FDU_492 SNP 12.70 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG10 s_1A6FDU_492 SNP 12.66 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG10 s_1A6FDU_492 SNP 11.80 (cM) Automated name-based View Maps
s_1CR8Z9_948 SNP 10.88 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1CR8Z9_948 SNP 12.70 (cM) Automated name-based View Maps
s_1CLYX8_1184 SNP 10.88 Quercus petraea - Genetic_Qs29_2015 - LG10 s_1CLYX8_1184 SNP 18.50 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1CLYX8_1184 SNP 13.80 (cM) Automated name-based View Maps
s_1B1V8C_1374 SNP 13.45 Quercus petraea - Genetic_Qs29_2015 - LG10 s_1B1V8C_1374 SNP 19.38 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1B1V8C_1374 SNP 16.00 (cM) Automated name-based View Maps
v_4159_306 SNP 13.45 Quercus robur - Genetic_x11P2_2015 - LG10 v_4159_306 SNP 19.31 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 v_4159_306 SNP 16.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG10 v_4159_306 SNP 14.61 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG10 v_4159_306 SNP 15.74 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG10 v_4159_306 SNP 19.38 (cM) Automated name-based View Maps
v_14030_189 SNP 13.45 Quercus petraea - Genetic_Qs29_2015 - LG10 v_14030_189 SNP 19.38 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG10 v_14030_189 SNP 15.74 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 v_14030_189 SNP 16.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG10 v_14030_189 SNP 19.31 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG10 v_14030_189 SNP 15.17 (cM) Automated name-based View Maps
s_1B1AG7_637 SNP 14.88 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1B1AG7_637 SNP 16.70 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG10 s_1B1AG7_637 SNP 17.92 (cM) Automated name-based View Maps
s_1A3F9W_751 SNP 14.88 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1A3F9W_751 SNP 16.70 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG10 s_1A3F9W_751 SNP 17.92 (cM) Automated name-based View Maps
v_536_180 SNP 17.17 Quercus robur - Genetic_x11P2_2015 - LG10 v_536_180 SNP 20.19 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 v_536_180 SNP 18.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG10 v_536_180 SNP 20.80 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG10 v_536_180 SNP 19.46 (cM) Automated name-based View Maps
v_12844_70 SNP 18.31 Quercus petraea - Genetic_Qs28f_2015 - LG10 v_12844_70 SNP 22.59 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG10 v_12844_70 SNP 21.95 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 v_12844_70 SNP 19.80 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG10 v_12844_70 SNP 20.69 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG10 v_12844_70 SNP 21.36 (cM) Automated name-based View Maps
s_1ASVLP_2231 SNP 19.17 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1ASVLP_2231 SNP 20.60 (cM) Automated name-based View Maps

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