CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus petraea-Genetic_Qs28f_2015  (Reference Set)
Min. Correspondence
Align Vertically
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Maps LG2
Start
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Magnification
Flipped



 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus petraea - Genetic_Qs28f_2015 [ View Map Set Info ]
Map Name: LG2
Map Start: 0.00 cM
Map Stop: 75.73 cM
Features by Type:
259 SNP
259 Total

Map Features

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Items 1 to 25 of 259.       of 11 | Next
Quercus petraea - Genetic_Qs28f_2015 - LG2
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
s_1A1P6I_674 SNP 0.00 Quercus petraea - Genetic_Qs28m_2015 - LG2 s_1A1P6I_674 SNP 0.56 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG2 s_1A1P6I_674 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1A1P6I_674 SNP 0.70 (cM) Automated name-based View Maps
s_2FHH8O_315 SNP 0.00 Quercus petraea - Genetic_Qs28m_2015 - LG2 s_2FHH8O_315 SNP 1.69 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_2FHH8O_315 SNP 0.70 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG2 s_2FHH8O_315 SNP 0.00 (cM) Automated name-based View Maps
v_1917_189 SNP 0.00 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 v_1917_189 SNP 0.70 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG2 v_1917_189 SNP 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG2 v_1917_189 SNP 1.69 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG2 v_1917_189 SNP 0.29 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG2 v_1917_189 SNP 0.00 (cM) Automated name-based View Maps
s_1AQD6J_367 SNP 0.00 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1AQD6J_367 SNP 0.70 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG2 s_1AQD6J_367 SNP 0.56 (cM) Automated name-based View Maps
s_1ATR24_545 SNP 0.00 Quercus robur - Genetic_A4_2015 - LG2 s_1ATR24_545 SNP 1.24 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG2 s_1ATR24_545 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1ATR24_545 SNP 1.00 (cM) Automated name-based View Maps
s_1A4VPK_728 SNP 0.29 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1A4VPK_728 SNP 1.30 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG2 s_1A4VPK_728 SNP 2.25 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG2 s_1A4VPK_728 SNP 0.62 (cM) Automated name-based View Maps
s_1A48U1_307 SNP 0.86 Quercus robur - Genetic_A4_2015 - LG2 s_1A48U1_307 SNP 1.85 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG2 s_1A48U1_307 SNP 2.63 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1A48U1_307 SNP 1.90 (cM) Automated name-based View Maps
s_1BES6B_1008 SNP 1.71 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1BES6B_1008 SNP 2.70 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG2 s_1BES6B_1008 SNP 5.27 (cM) Automated name-based View Maps
s_1CDH09_311 SNP 2.57 Quercus robur - Genetic_x11P2_2015 - LG2 s_1CDH09_311 SNP 6.14 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1CDH09_311 SNP 3.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG2 s_1CDH09_311 SNP 3.40 (cM) Automated name-based View Maps
s_1CYFHH_1043 SNP 2.86 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1CYFHH_1043 SNP 3.90 (cM) Automated name-based View Maps
s_1AI6BE_806 SNP 3.43 Quercus robur - Genetic_x3P_2015 - LG2 s_1AI6BE_806 SNP 4.01 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1AI6BE_806 SNP 4.60 (cM) Automated name-based View Maps
s_1AW0V2_1404 SNP 3.43 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1AW0V2_1404 SNP 4.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG2 s_1AW0V2_1404 SNP 4.01 (cM) Automated name-based View Maps
s_1A18DI_793 SNP 4.00 Quercus petraea - Genetic_Qs29_2015 - LG2 s_1A18DI_793 SNP 1.75 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG2 s_1A18DI_793 SNP 7.30 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1A18DI_793 SNP 4.70 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG2 s_1A18DI_793 SNP 4.01 (cM) Automated name-based View Maps
v_9806_117 SNP 4.00 Quercus robur - Genetic_x11P2_2015 - LG2 v_9806_117 SNP 7.90 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG2 v_9806_117 SNP 2.63 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG2 v_9806_117 SNP 7.30 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 v_9806_117 SNP 5.30 (cM) Automated name-based View Maps
s_1A40T8_716 SNP 5.43 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1A40T8_716 SNP 6.60 (cM) Automated name-based View Maps
s_1BTFZY_1330 SNP 6.00 Quercus petraea - Genetic_Qs28m_2015 - LG2 s_1BTFZY_1330 SNP 8.43 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1BTFZY_1330 SNP 7.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG2 s_1BTFZY_1330 SNP 4.39 (cM) Automated name-based View Maps
v_12266_135 SNP 6.00 Quercus petraea - Genetic_Qs28m_2015 - LG2 v_12266_135 SNP 8.43 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 v_12266_135 SNP 7.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG2 v_12266_135 SNP 4.39 (cM) Automated name-based View Maps
s_1AJ9OA_1746 SNP 6.00 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1AJ9OA_1746 SNP 7.30 (cM) Automated name-based View Maps
s_1AM5DX_1319 SNP 6.00 Quercus robur - Genetic_x3P_2015 - LG2 s_1AM5DX_1319 SNP 7.10 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1AM5DX_1319 SNP 7.60 (cM) Automated name-based View Maps
s_1AD54R_1446 SNP 6.00 Quercus robur - Genetic_A4_2015 - LG2 s_1AD54R_1446 SNP 7.41 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1AD54R_1446 SNP 7.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG2 s_1AD54R_1446 SNP 11.41 (cM) Automated name-based View Maps
s_1AGM8_1754 SNP 6.29 Quercus petraea - Genetic_Qs28m_2015 - LG2 s_1AGM8_1754 SNP 8.99 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG2 s_1AGM8_1754 SNP 4.39 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1AGM8_1754 SNP 7.60 (cM) Automated name-based View Maps
s_1AQ3YQ_445 SNP 6.86 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1AQ3YQ_445 SNP 8.70 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG2 s_1AQ3YQ_445 SNP 10.11 (cM) Automated name-based View Maps
s_BLM4K_528 SNP 6.86 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_BLM4K_528 SNP 8.70 (cM) Automated name-based View Maps
s_1A5Z9J_1060 SNP 7.14 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1A5Z9J_1060 SNP 9.00 (cM) Automated name-based View Maps
s_1A2P1Q_570 SNP 7.14 Quercus petraea - Genetic_Qs28m_2015 - LG2 s_1A2P1Q_570 SNP 10.11 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1A2P1Q_570 SNP 9.70 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG2 s_1A2P1Q_570 SNP 7.90 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG2 s_1A2P1Q_570 SNP 9.57 (cM) Automated name-based View Maps

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