CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus petraea-Genetic_Qs28f_2015  (Reference Set)
Min. Correspondence
Align Vertically
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Maps LG3
Start
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Magnification
Flipped



 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus petraea - Genetic_Qs28f_2015 [ View Map Set Info ]
Map Name: LG3
Map Start: 0.00 cM
Map Stop: 52.02 cM
Features by Type:
100 SNP
100 Total

Map Features

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Items 1 to 25 of 100.       of 4 | Next
Quercus petraea - Genetic_Qs28f_2015 - LG3
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
v_7974_341 SNP 0.00 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 v_7974_341 SNP 3.30 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG3 v_7974_341 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG3 v_7974_341 SNP 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG3 v_7974_341 SNP 0.00 (cM) Automated name-based View Maps
s_2F1E04_607 SNP 1.72 Quercus robur - Genetic_x11P2_2015 - LG3 s_2F1E04_607 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_2F1E04_607 SNP 5.10 (cM) Automated name-based View Maps
s_1AKLQF_559 SNP 2.00 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1AKLQF_559 SNP 5.90 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG3 s_1AKLQF_559 SNP 2.81 (cM) Automated name-based View Maps
s_1AW4ZD_502 SNP 2.29 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1AW4ZD_502 SNP 5.90 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG3 s_1AW4ZD_502 SNP 0.88 (cM) Automated name-based View Maps
v_12310_201 SNP 2.29 Quercus petraea - Genetic_Qs21_2015 - LG3 v_12310_201 SNP 2.29 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 v_12310_201 SNP 6.20 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG3 v_12310_201 SNP 1.75 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG3 v_12310_201 SNP 6.15 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG3 v_12310_201 SNP 1.12 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG3 v_12310_201 SNP 2.78 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG3 v_12310_201 SNP 2.81 (cM) Automated name-based View Maps
s_1A5CI8_114 SNP 2.29 Quercus petraea - Genetic_Qs28m_2015 - LG3 s_1A5CI8_114 SNP 2.81 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1A5CI8_114 SNP 6.20 (cM) Automated name-based View Maps
s_1ANJ81_617 SNP 2.29 Quercus petraea - Genetic_Qs28m_2015 - LG3 s_1ANJ81_617 SNP 2.81 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1ANJ81_617 SNP 6.20 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG3 s_1ANJ81_617 SNP 6.15 (cM) Automated name-based View Maps
s_1A4L7L_341 SNP 3.14 Quercus robur - Genetic_A4_2015 - LG3 s_1A4L7L_341 SNP 3.70 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG3 s_1A4L7L_341 SNP 4.63 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG3 s_1A4L7L_341 SNP 3.94 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1A4L7L_341 SNP 7.30 (cM) Automated name-based View Maps
s_1A0VYH_629 SNP 3.43 Quercus robur - Genetic_A4_2015 - LG3 s_1A0VYH_629 SNP 3.70 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1A0VYH_629 SNP 7.30 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG3 s_1A0VYH_629 SNP 3.94 (cM) Automated name-based View Maps
s_1A4AJB_1098 SNP 3.71 Quercus petraea - Genetic_Qs28m_2015 - LG3 s_1A4AJB_1098 SNP 4.50 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1A4AJB_1098 SNP 7.90 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG3 s_1A4AJB_1098 SNP 4.94 (cM) Automated name-based View Maps
v_8490_254 SNP 3.71 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 v_8490_254 SNP 7.90 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG3 v_8490_254 SNP 4.50 (cM) Automated name-based View Maps
s_1COZ5R_177 SNP 3.71 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1COZ5R_177 SNP 7.90 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG3 s_1COZ5R_177 SNP 4.50 (cM) Automated name-based View Maps
s_1AUB0H_460 SNP 3.71 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1AUB0H_460 SNP 7.90 (cM) Automated name-based View Maps
v_12390_238 SNP 4.00 Quercus petraea - Genetic_Qs28m_2015 - LG3 v_12390_238 SNP 4.50 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 v_12390_238 SNP 8.20 (cM) Automated name-based View Maps
s_1CXNYP_1722 SNP 6.00 Quercus robur - Genetic_x11P2_2015 - LG3 s_1CXNYP_1722 SNP 5.27 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1CXNYP_1722 SNP 10.20 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG3 s_1CXNYP_1722 SNP 7.72 (cM) Automated name-based View Maps
s_1AF8ER_102 SNP 6.00 Quercus petraea - Genetic_Qs28m_2015 - LG3 s_1AF8ER_102 SNP 7.31 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG3 s_1AF8ER_102 SNP 7.72 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1AF8ER_102 SNP 11.00 (cM) Automated name-based View Maps
s_1C494G_1096 SNP 6.57 Quercus robur - Genetic_x11P2_2015 - LG3 s_1C494G_1096 SNP 7.02 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1C494G_1096 SNP 11.00 (cM) Automated name-based View Maps
s_1A39ML_1285 SNP 6.86 Quercus robur - Genetic_x11P2_2015 - LG3 s_1A39ML_1285 SNP 7.02 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1A39ML_1285 SNP 11.00 (cM) Automated name-based View Maps
s_1AEKN6_868 SNP 8.29 Quercus robur - Genetic_A4_2015 - LG3 s_1AEKN6_868 SNP 7.41 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1AEKN6_868 SNP 12.50 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG3 s_1AEKN6_868 SNP 7.87 (cM) Automated name-based View Maps
s_1AO61N_474 SNP 8.29 Quercus petraea - Genetic_Qs28m_2015 - LG3 s_1AO61N_474 SNP 7.87 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG3 s_1AO61N_474 SNP 7.41 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1AO61N_474 SNP 12.50 (cM) Automated name-based View Maps
s_1BY7RW_1224 SNP 8.29 Quercus petraea - Genetic_Qs28m_2015 - LG3 s_1BY7RW_1224 SNP 7.87 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG3 s_1BY7RW_1224 SNP 7.41 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1BY7RW_1224 SNP 12.50 (cM) Automated name-based View Maps
s_1DBVR3_394 SNP 8.57 Quercus petraea - Genetic_Qs28m_2015 - LG3 s_1DBVR3_394 SNP 7.87 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1DBVR3_394 SNP 12.50 (cM) Automated name-based View Maps
s_1C2QS8_508 SNP 8.86 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1C2QS8_508 SNP 12.50 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG3 s_1C2QS8_508 SNP 7.87 (cM) Automated name-based View Maps
s_1A267R_1478 SNP 8.86 Quercus petraea - Genetic_Qs28m_2015 - LG3 s_1A267R_1478 SNP 8.99 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG3 s_1A267R_1478 SNP 7.72 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1A267R_1478 SNP 12.80 (cM) Automated name-based View Maps
s_1AXVA1_312 SNP 8.86 Quercus robur - Genetic_x11P2_2015 - LG3 s_1AXVA1_312 SNP 8.78 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1AXVA1_312 SNP 12.80 (cM) Automated name-based View Maps

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