CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus petraea-Genetic_Qs28f_2015  (Reference Set)
Min. Correspondence
Align Vertically
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Maps LG4
Start
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Magnification
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 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus petraea - Genetic_Qs28f_2015 [ View Map Set Info ]
Map Name: LG4
Map Start: 0.00 cM
Map Stop: 64.06 cM
Features by Type:
72 SNP
72 Total

Map Features

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Items 1 to 25 of 72.       of 3 | Next
Quercus petraea - Genetic_Qs28f_2015 - LG4
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
s_1DY96Q_819 SNP 0.00 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1DY96Q_819 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG4 s_1DY96Q_819 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG4 s_1DY96Q_819 SNP 0.00 (cM) Automated name-based View Maps
s_1ASQDC_778 SNP 0.57 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1ASQDC_778 SNP 0.00 (cM) Automated name-based View Maps
s_1A1QE5_1745 SNP 1.43 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1A1QE5_1745 SNP 0.90 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG4 s_1A1QE5_1745 SNP 1.12 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG4 s_1A1QE5_1745 SNP 0.88 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG4 s_1A1QE5_1745 SNP 0.00 (cM) Automated name-based View Maps
s_1A1FLG_563 SNP 2.57 Quercus petraea - Genetic_Qs28m_2015 - LG4 s_1A1FLG_563 SNP 1.12 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1A1FLG_563 SNP 0.90 (cM) Automated name-based View Maps
s_2F4JLS_807 SNP 2.86 Quercus robur - Genetic_x11P2_2015 - LG4 s_2F4JLS_807 SNP 2.63 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_2F4JLS_807 SNP 2.50 (cM) Automated name-based View Maps
v_320_286 SNP 4.86 Quercus petraea - Genetic_Qs28m_2015 - LG4 v_320_286 SNP 4.50 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 v_320_286 SNP 2.50 (cM) Automated name-based View Maps
s_2F1GB0_316 SNP 6.52 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_2F1GB0_316 SNP 3.20 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG4 s_2F1GB0_316 SNP 3.51 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG4 s_2F1GB0_316 SNP 5.62 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG4 s_2F1GB0_316 SNP 3.09 (cM) Automated name-based View Maps
s_1B9AWY_460 SNP 4.86 Quercus robur - Genetic_x11P2_2015 - LG4 s_1B9AWY_460 SNP 2.63 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1B9AWY_460 SNP 3.20 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG4 s_1B9AWY_460 SNP 2.16 (cM) Automated name-based View Maps
s_1AKS15_1534 SNP 6.86 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1AKS15_1534 SNP 3.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG4 s_1AKS15_1534 SNP 2.16 (cM) Automated name-based View Maps
s_1AWU7M_1577 SNP 8.29 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1AWU7M_1577 SNP 3.80 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG4 s_1AWU7M_1577 SNP 3.51 (cM) Automated name-based View Maps
s_2FVCUQ_171 SNP 10.57 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_2FVCUQ_171 SNP 6.10 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG4 s_2FVCUQ_171 SNP 5.26 (cM) Automated name-based View Maps
s_1AWWMZ_1207 SNP 10.86 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1AWWMZ_1207 SNP 6.10 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG4 s_1AWWMZ_1207 SNP 5.26 (cM) Automated name-based View Maps
v_3837_109 SNP 10.57 Quercus petraea - Genetic_Qs28m_2015 - LG4 v_3837_109 SNP 10.13 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 v_3837_109 SNP 6.10 (cM) Automated name-based View Maps
s_1DSJN5_1340 SNP 10.57 Quercus petraea - Genetic_Qs28m_2015 - LG4 s_1DSJN5_1340 SNP 10.13 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1DSJN5_1340 SNP 6.10 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG4 s_1DSJN5_1340 SNP 6.14 (cM) Automated name-based View Maps
s_1APWY7_1245 SNP 10.57 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1APWY7_1245 SNP 6.10 (cM) Automated name-based View Maps
s_1A6KPA_864 SNP 12.29 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1A6KPA_864 SNP 6.20 (cM) Automated name-based View Maps
s_1CSU8L_330 SNP 14.01 Quercus petraea - Genetic_Qs29_2015 - LG4 s_1CSU8L_330 SNP 7.90 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG4 s_1CSU8L_330 SNP 12.94 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1CSU8L_330 SNP 8.00 (cM) Automated name-based View Maps
v_706_168 SNP 14.58 Quercus robur - Genetic_x11P2_2015 - LG4 v_706_168 SNP 7.02 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG4 v_706_168 SNP 13.50 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 v_706_168 SNP 8.50 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG4 v_706_168 SNP 7.90 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG4 v_706_168 SNP 8.43 (cM) Automated name-based View Maps
v_14820_161 SNP 16.00 Quercus petraea - Genetic_Qs28m_2015 - LG4 v_14820_161 SNP 14.06 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG4 v_14820_161 SNP 11.15 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 v_14820_161 SNP 8.80 (cM) Automated name-based View Maps
v_207_133 SNP 19.44 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 v_207_133 SNP 10.30 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG4 v_207_133 SNP 8.77 (cM) Automated name-based View Maps
s_1BNLBG_1000 SNP 23.16 Quercus robur - Genetic_x11P2_2015 - LG4 s_1BNLBG_1000 SNP 12.29 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1BNLBG_1000 SNP 13.80 (cM) Automated name-based View Maps
s_1A8J2P_1063 SNP 24.59 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1A8J2P_1063 SNP 15.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG4 s_1A8J2P_1063 SNP 13.16 (cM) Automated name-based View Maps
s_1BPTED_1109 SNP 24.88 Quercus petraea - Genetic_Qs28m_2015 - LG4 s_1BPTED_1109 SNP 21.40 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1BPTED_1109 SNP 15.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG4 s_1BPTED_1109 SNP 13.90 (cM) Automated name-based View Maps
s_2G3F3G_919 SNP 26.02 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_2G3F3G_919 SNP 16.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG4 s_2G3F3G_919 SNP 14.51 (cM) Automated name-based View Maps
s_1C7L1U_1553 SNP 26.30 Quercus robur - Genetic_A4_2015 - LG4 s_1C7L1U_1553 SNP 7.43 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1C7L1U_1553 SNP 16.70 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG4 s_1C7L1U_1553 SNP 21.96 (cM) Automated name-based View Maps

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