CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus petraea-Genetic_Qs28f_2015  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG8
Start
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Magnification
Flipped



 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus petraea - Genetic_Qs28f_2015 [ View Map Set Info ]
Map Name: LG8
Map Start: 0.00 cM
Map Stop: 53.44 cM
Features by Type:
138 SNP
138 Total

Map Features

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Items 1 to 25 of 138.       of 6 | Next
Quercus petraea - Genetic_Qs28f_2015 - LG8
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
s_1A9STZ_1334 SNP 0.00 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1A9STZ_1334 SNP 2.70 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG8 s_1A9STZ_1334 SNP 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG8 s_1A9STZ_1334 SNP 0.00 (cM) Automated name-based View Maps
s_1AZGHZ_1356 SNP 2.00 Quercus robur - Genetic_x11P2_2015 - LG8 s_1AZGHZ_1356 SNP 1.75 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1AZGHZ_1356 SNP 2.70 (cM) Automated name-based View Maps
s_AE01CHF9N_1577 SNP 2.00 Quercus robur - Genetic_x11P2_2015 - LG8 s_AE01CHF9N_1577 SNP 3.51 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG8 s_AE01CHF9N_1577 SNP 1.54 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_AE01CHF9N_1577 SNP 4.20 (cM) Automated name-based View Maps
s_1AEXZQ_163 SNP 2.00 Quercus robur - Genetic_x11P2_2015 - LG8 s_1AEXZQ_163 SNP 3.51 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1AEXZQ_163 SNP 4.20 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG8 s_1AEXZQ_163 SNP 1.54 (cM) Automated name-based View Maps
s_1C4IQ4_1508 SNP 4.86 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1C4IQ4_1508 SNP 5.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG8 s_1C4IQ4_1508 SNP 3.51 (cM) Automated name-based View Maps
v_1388_115 SNP 4.00 Quercus petraea - Genetic_Qs28m_2015 - LG8 v_1388_115 SNP 2.25 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG8 v_1388_115 SNP 3.51 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 v_1388_115 SNP 5.00 (cM) Automated name-based View Maps
s_1AKBC7_1090 SNP 3.43 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1AKBC7_1090 SNP 5.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG8 s_1AKBC7_1090 SNP 2.25 (cM) Automated name-based View Maps
s_1A240P_1328 SNP 5.43 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1A240P_1328 SNP 5.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG8 s_1A240P_1328 SNP 2.25 (cM) Automated name-based View Maps
s_1D5BJQ_1147 SNP 6.86 Quercus robur - Genetic_A4_2015 - LG8 s_1D5BJQ_1147 SNP 5.87 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG8 s_1D5BJQ_1147 SNP 2.81 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG8 s_1D5BJQ_1147 SNP 3.51 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1D5BJQ_1147 SNP 6.10 (cM) Automated name-based View Maps
s_1AH71Y_771 SNP 6.86 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1AH71Y_771 SNP 6.10 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG8 s_1AH71Y_771 SNP 2.81 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG8 s_1AH71Y_771 SNP 7.02 (cM) Automated name-based View Maps
s_A70M2_378 SNP 6.86 Quercus petraea - Genetic_Qs28m_2015 - LG8 s_A70M2_378 SNP 2.81 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG8 s_A70M2_378 SNP 3.40 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_A70M2_378 SNP 6.10 (cM) Automated name-based View Maps
v_12073_585 SNP 6.86 Quercus petraea - Genetic_Qs28m_2015 - LG8 v_12073_585 SNP 3.37 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 v_12073_585 SNP 6.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG8 v_12073_585 SNP 6.17 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG8 v_12073_585 SNP 3.51 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG8 v_12073_585 SNP 3.93 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG8 v_12073_585 SNP 8.78 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG8 v_12073_585 SNP 8.00 (cM) Automated name-based View Maps
s_2H1YHF_689 SNP 7.14 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_2H1YHF_689 SNP 6.70 (cM) Automated name-based View Maps
s_1BIU5W_953 SNP 7.14 Quercus robur - Genetic_A4_2015 - LG8 s_1BIU5W_953 SNP 7.10 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1BIU5W_953 SNP 6.70 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG8 s_1BIU5W_953 SNP 3.37 (cM) Automated name-based View Maps
s_1C6F6U_1655 SNP 7.43 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1C6F6U_1655 SNP 6.70 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG8 s_1C6F6U_1655 SNP 3.37 (cM) Automated name-based View Maps
s_1A3QRK_144 SNP 9.43 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1A3QRK_144 SNP 9.00 (cM) Automated name-based View Maps
s_1B2MI4_635 SNP 10.00 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1B2MI4_635 SNP 11.20 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG8 s_1B2MI4_635 SNP 7.02 (cM) Automated name-based View Maps
v_AC9YF01_306 SNP 10.00 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 v_AC9YF01_306 SNP 11.20 (cM) Automated name-based View Maps
s_1A13QG_1021 SNP 10.57 Quercus petraea - Genetic_Qs28m_2015 - LG8 s_1A13QG_1021 SNP 10.73 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1A13QG_1021 SNP 13.50 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG8 s_1A13QG_1021 SNP 13.90 (cM) Automated name-based View Maps
s_1B9S0J_799 SNP 10.57 Quercus petraea - Genetic_Qs28m_2015 - LG8 s_1B9S0J_799 SNP 11.85 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1B9S0J_799 SNP 14.70 (cM) Automated name-based View Maps
s_1BNT0R_1367 SNP 10.86 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1BNT0R_1367 SNP 15.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG8 s_1BNT0R_1367 SNP 9.88 (cM) Automated name-based View Maps
s_1A3IBR_240 SNP 11.43 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1A3IBR_240 SNP 15.90 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG8 s_1A3IBR_240 SNP 16.37 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG8 s_1A3IBR_240 SNP 11.42 (cM) Automated name-based View Maps
s_2FJH92_256 SNP 11.43 Quercus robur - Genetic_x11P2_2015 - LG8 s_2FJH92_256 SNP 11.42 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_2FJH92_256 SNP 15.90 (cM) Automated name-based View Maps
s_1DA4QW_656 SNP 11.15 Quercus petraea - Genetic_Qs21_2015 - LG8 s_1DA4QW_656 SNP 18.89 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG8 s_1DA4QW_656 SNP 14.10 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1DA4QW_656 SNP 15.90 (cM) Automated name-based View Maps
s_1A5XQ3_1127 SNP 13.15 Quercus robur - Genetic_x11P2_2015 - LG8 s_1A5XQ3_1127 SNP 12.29 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG8 s_1A5XQ3_1127 SNP 17.70 (cM) Automated name-based View Maps

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