CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



Save link

* Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link.


General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus petraea-Genetic_Qs28f_2015  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG12
Start
Stop
Magnification
Flipped



 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus petraea - Genetic_Qs28f_2015 [ View Map Set Info ]
Map Name: LG12
Map Start: 0.00 cM
Map Stop: 57.46 cM
Features by Type:
105 SNP
105 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 105.       of 5 | Next
Quercus petraea - Genetic_Qs28f_2015 - LG12
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
s_1A3Y7L_454 SNP 0.00 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1A3Y7L_454 SNP 0.20 (cM) Automated name-based View Maps
v_2185_158 SNP 0.29 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 v_2185_158 SNP 0.50 (cM) Automated name-based View Maps
s_1DUNMR_768 SNP 5.16 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1DUNMR_768 SNP 5.40 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG12 s_1DUNMR_768 SNP 2.25 (cM) Automated name-based View Maps
v_9305_242 SNP 6.01 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 v_9305_242 SNP 6.20 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG12 v_9305_242 SNP 3.37 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG12 v_9305_242 SNP 7.92 (cM) Automated name-based View Maps
s_1BEL77_339 SNP 7.44 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1BEL77_339 SNP 7.10 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG12 s_1BEL77_339 SNP 5.25 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG12 s_1BEL77_339 SNP 5.62 (cM) Automated name-based View Maps
s_1EO8V5_710 SNP 7.73 Quercus petraea - Genetic_Qs29_2015 - LG12 s_1EO8V5_710 SNP 8.79 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG12 s_1EO8V5_710 SNP 5.62 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG12 s_1EO8V5_710 SNP 7.11 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1EO8V5_710 SNP 7.10 (cM) Automated name-based View Maps
s_1A3OWO_492 SNP 8.02 Quercus petraea - Genetic_Qs28m_2015 - LG12 s_1A3OWO_492 SNP 5.06 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1A3OWO_492 SNP 7.10 (cM) Automated name-based View Maps
s_1ALS72_321 SNP 10.02 Quercus petraea - Genetic_Qs28m_2015 - LG12 s_1ALS72_321 SNP 7.30 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1ALS72_321 SNP 9.60 (cM) Automated name-based View Maps
s_1AEKGW_75 SNP 12.59 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1AEKGW_75 SNP 13.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG12 s_1AEKGW_75 SNP 10.54 (cM) Automated name-based View Maps
s_1BKA82_890 SNP 14.02 Quercus petraea - Genetic_Qs28m_2015 - LG12 s_1BKA82_890 SNP 10.68 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1BKA82_890 SNP 15.00 (cM) Automated name-based View Maps
s_2IDTCF_585 SNP 14.02 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_2IDTCF_585 SNP 15.00 (cM) Automated name-based View Maps
v_838_303 SNP 14.30 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 v_838_303 SNP 15.30 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG12 v_838_303 SNP 14.63 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG12 v_838_303 SNP 11.24 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG12 v_838_303 SNP 12.30 (cM) Automated name-based View Maps
s_1BTF2S_648 SNP 14.59 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1BTF2S_648 SNP 15.70 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG12 s_1BTF2S_648 SNP 11.24 (cM) Automated name-based View Maps
s_1BO7ME_895 SNP 15.73 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1BO7ME_895 SNP 16.80 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG12 s_1BO7ME_895 SNP 11.80 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG12 s_1BO7ME_895 SNP 15.44 (cM) Automated name-based View Maps
v_4510_423 SNP 15.73 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 v_4510_423 SNP 16.80 (cM) Automated name-based View Maps
s_1A1S4N_395 SNP 15.73 Quercus robur - Genetic_x11P2_2015 - LG12 s_1A1S4N_395 SNP 14.93 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG12 s_1A1S4N_395 SNP 21.32 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1A1S4N_395 SNP 16.90 (cM) Automated name-based View Maps
v_AD21YG04_51 SNP 15.73 Quercus petraea - Genetic_Qs28m_2015 - LG12 v_AD21YG04_51 SNP 11.80 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 v_AD21YG04_51 SNP 16.90 (cM) Automated name-based View Maps
s_2F2FOX_373 SNP 16.88 Quercus robur - Genetic_x3P_2015 - LG12 s_2F2FOX_373 SNP 16.06 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG12 s_2F2FOX_373 SNP 12.36 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_2F2FOX_373 SNP 17.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG12 s_2F2FOX_373 SNP 16.69 (cM) Automated name-based View Maps
s_2F1IZB_484 SNP 16.31 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_2F1IZB_484 SNP 17.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG12 s_2F1IZB_484 SNP 16.06 (cM) Automated name-based View Maps
v_13555_231 SNP 16.59 Quercus petraea - Genetic_Qs28m_2015 - LG12 v_13555_231 SNP 12.36 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 v_13555_231 SNP 17.40 (cM) Automated name-based View Maps
s_2G9831_212 SNP 18.31 Quercus robur - Genetic_A4_2015 - LG12 s_2G9831_212 SNP 22.55 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_2G9831_212 SNP 18.10 (cM) Automated name-based View Maps
s_1AJ4L7_222 SNP 18.31 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1AJ4L7_222 SNP 18.10 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG12 s_1AJ4L7_222 SNP 22.55 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG12 s_1AJ4L7_222 SNP 16.69 (cM) Automated name-based View Maps
s_1A71W7_356 SNP 18.88 Quercus petraea - Genetic_Qs28m_2015 - LG12 s_1A71W7_356 SNP 14.05 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1A71W7_356 SNP 18.90 (cM) Automated name-based View Maps
s_1AEGZ_88 SNP 21.16 Quercus robur - Genetic_x11P2_2015 - LG12 s_1AEGZ_88 SNP 19.32 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1AEGZ_88 SNP 20.60 (cM) Automated name-based View Maps
s_1A35TY_389 SNP 20.59 Quercus robur - Genetic_x11P2_2015 - LG12 s_1A35TY_389 SNP 19.32 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1A35TY_389 SNP 20.60 (cM) Automated name-based View Maps

CMap Contact

Evoltree    BioGeCo    INRA    logo_ff    logo_gmod