CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus petraea-Genetic_Qs28m_2015  (Reference Set)
Min. Correspondence
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Maps LG4
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Magnification
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 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus petraea - Genetic_Qs28m_2015 [ View Map Set Info ]
Map Name: LG4
Map Start: 0.00 cM
Map Stop: 67.66 cM
Features by Type:
56 SNP
56 Total

Map Features

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Items 1 to 25 of 56.       of 3 | Next
Quercus petraea - Genetic_Qs28m_2015 - LG4
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
s_1CCJPV_1444 SNP 0.00 Quercus petraea - Genetic_Qs29_2015 - LG4 s_1CCJPV_1444 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG4 s_1CCJPV_1444 SNP 0.93 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1CCJPV_1444 SNP 0.00 (cM) Automated name-based View Maps
s_1A1QE5_1745 SNP 1.12 Quercus robur - Genetic_A4_2015 - LG4 s_1A1QE5_1745 SNP 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG4 s_1A1QE5_1745 SNP 1.43 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1A1QE5_1745 SNP 0.90 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG4 s_1A1QE5_1745 SNP 0.88 (cM) Automated name-based View Maps
s_1A1FLG_563 SNP 1.12 Quercus petraea - Genetic_Qs28f_2015 - LG4 s_1A1FLG_563 SNP 2.57 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1A1FLG_563 SNP 0.90 (cM) Automated name-based View Maps
s_2H9XSI_818 SNP 1.69 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_2H9XSI_818 SNP 1.50 (cM) Automated name-based View Maps
s_1A2U3S_1213 SNP 4.50 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1A2U3S_1213 SNP 2.50 (cM) Automated name-based View Maps
v_320_286 SNP 4.50 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 v_320_286 SNP 2.50 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG4 v_320_286 SNP 4.86 (cM) Automated name-based View Maps
s_2F7OY9_468 SNP 5.62 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_2F7OY9_468 SNP 3.20 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG4 s_2F7OY9_468 SNP 3.51 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG4 s_2F7OY9_468 SNP 3.09 (cM) Automated name-based View Maps
s_2F1GB0_316 SNP 5.62 Quercus robur - Genetic_x3P_2015 - LG4 s_2F1GB0_316 SNP 3.09 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_2F1GB0_316 SNP 3.20 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG4 s_2F1GB0_316 SNP 3.51 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG4 s_2F1GB0_316 SNP 6.52 (cM) Automated name-based View Maps
s_1A3UE0_229 SNP 5.62 Quercus petraea - Genetic_Qs21_2015 - LG4 s_1A3UE0_229 SNP 5.43 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG4 s_1A3UE0_229 SNP 2.81 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1A3UE0_229 SNP 3.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG4 s_1A3UE0_229 SNP 2.16 (cM) Automated name-based View Maps
v_3837_109 SNP 10.13 Quercus petraea - Genetic_Qs28f_2015 - LG4 v_3837_109 SNP 10.57 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 v_3837_109 SNP 6.10 (cM) Automated name-based View Maps
s_1DSJN5_1340 SNP 10.13 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1DSJN5_1340 SNP 6.10 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG4 s_1DSJN5_1340 SNP 10.57 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG4 s_1DSJN5_1340 SNP 6.14 (cM) Automated name-based View Maps
s_1CSU8L_330 SNP 12.94 Quercus petraea - Genetic_Qs28f_2015 - LG4 s_1CSU8L_330 SNP 14.01 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG4 s_1CSU8L_330 SNP 7.90 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1CSU8L_330 SNP 8.00 (cM) Automated name-based View Maps
v_706_168 SNP 13.50 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 v_706_168 SNP 8.50 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG4 v_706_168 SNP 8.43 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG4 v_706_168 SNP 7.90 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG4 v_706_168 SNP 14.58 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG4 v_706_168 SNP 7.02 (cM) Automated name-based View Maps
v_14820_161 SNP 14.06 Quercus petraea - Genetic_Qs28f_2015 - LG4 v_14820_161 SNP 16.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 v_14820_161 SNP 8.80 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG4 v_14820_161 SNP 11.15 (cM) Automated name-based View Maps
s_1BNUC_1145 SNP 14.62 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1BNUC_1145 SNP 9.40 (cM) Automated name-based View Maps
s_BB25E_574 SNP 15.75 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_BB25E_574 SNP 10.50 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG4 s_BB25E_574 SNP 13.16 (cM) Automated name-based View Maps
s_1A74KW_323 SNP 18.01 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1A74KW_323 SNP 80.70 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1A74KW_323 SNP 12.80 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG2 s_1A74KW_323 SNP 94.84 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG2 s_1A74KW_323 SNP 89.85 (cM) Automated name-based View Maps
s_1BPTED_1109 SNP 21.40 Quercus robur - Genetic_x3P_2015 - LG4 s_1BPTED_1109 SNP 13.90 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1BPTED_1109 SNP 15.40 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG4 s_1BPTED_1109 SNP 24.88 (cM) Automated name-based View Maps
s_1C7L1U_1553 SNP 21.96 Quercus robur - Genetic_A4_2015 - LG4 s_1C7L1U_1553 SNP 7.43 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1C7L1U_1553 SNP 16.70 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG4 s_1C7L1U_1553 SNP 26.30 (cM) Automated name-based View Maps
s_AE02FHHEG_597 SNP 22.53 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_AE02FHHEG_597 SNP 18.70 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG4 s_AE02FHHEG_597 SNP 22.84 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG4 s_AE02FHHEG_597 SNP 15.44 (cM) Automated name-based View Maps
v_913_208 SNP 24.77 Quercus petraea - Genetic_Qs28f_2015 - LG4 v_913_208 SNP 28.30 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 v_913_208 SNP 18.70 (cM) Automated name-based View Maps
s_1A8M1X_216 SNP 27.59 Quercus petraea - Genetic_Qs28f_2015 - LG4 s_1A8M1X_216 SNP 33.74 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG4 s_1A8M1X_216 SNP 26.35 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1A8M1X_216 SNP 23.50 (cM) Automated name-based View Maps
s_1B0PR8_1153 SNP 37.84 Quercus robur - Genetic_x3P_2015 - LG4 s_1B0PR8_1153 SNP 24.71 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG4 s_1B0PR8_1153 SNP 33.37 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG4 s_1B0PR8_1153 SNP 41.48 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1B0PR8_1153 SNP 31.80 (cM) Automated name-based View Maps
s_1AXNLB_327 SNP 37.84 Quercus petraea - Genetic_Qs28f_2015 - LG4 s_1AXNLB_327 SNP 41.48 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1AXNLB_327 SNP 31.80 (cM) Automated name-based View Maps
s_1A2HJR_913 SNP 38.96 Quercus petraea - Genetic_Qs29_2015 - LG4 s_1A2HJR_913 SNP 33.37 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG4 s_1A2HJR_913 SNP 43.19 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG4 s_1A2HJR_913 SNP 25.33 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1A2HJR_913 SNP 33.10 (cM) Automated name-based View Maps

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