CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus petraea-Genetic_Qs28m_2015  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG12
Start
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Magnification
Flipped



 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus petraea - Genetic_Qs28m_2015 [ View Map Set Info ]
Map Name: LG12
Map Start: 0.00 cM
Map Stop: 50.58 cM
Features by Type:
95 SNP
95 Total

Map Features

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Items 1 to 25 of 95.       of 4 | Next
Quercus petraea - Genetic_Qs28m_2015 - LG12
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
s_1CTJ3J_556 SNP 0.00 Quercus robur - Genetic_x3P_2015 - LG12 s_1CTJ3J_556 SNP 1.24 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1CTJ3J_556 SNP 3.10 (cM) Automated name-based View Maps
s_2HQOUK_864 SNP 0.56 Quercus robur - Genetic_A4_2015 - LG12 s_2HQOUK_864 SNP 3.71 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_2HQOUK_864 SNP 3.70 (cM) Automated name-based View Maps
s_1AGEGO_1029 SNP 0.56 Quercus petraea - Genetic_Qs29_2015 - LG12 s_1AGEGO_1029 SNP 1.75 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1AGEGO_1029 SNP 3.70 (cM) Automated name-based View Maps
s_1DUNMR_768 SNP 2.25 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1DUNMR_768 SNP 5.40 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG12 s_1DUNMR_768 SNP 5.16 (cM) Automated name-based View Maps
v_9305_242 SNP 3.37 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 v_9305_242 SNP 6.20 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG12 v_9305_242 SNP 6.01 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG12 v_9305_242 SNP 7.92 (cM) Automated name-based View Maps
s_2F20KC_1356 SNP 3.93 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_2F20KC_1356 SNP 6.50 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG12 s_2F20KC_1356 SNP 8.79 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG12 s_2F20KC_1356 SNP 4.63 (cM) Automated name-based View Maps
s_1BYIQ4_920 SNP 3.93 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1BYIQ4_920 SNP 6.50 (cM) Automated name-based View Maps
s_1BEL77_339 SNP 5.62 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1BEL77_339 SNP 7.10 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG12 s_1BEL77_339 SNP 5.25 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG12 s_1BEL77_339 SNP 7.44 (cM) Automated name-based View Maps
s_1AD76Y_251 SNP 5.62 Quercus petraea - Genetic_Qs21_2015 - LG12 s_1AD76Y_251 SNP 2.86 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1AD76Y_251 SNP 7.10 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG12 s_1AD76Y_251 SNP 5.25 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG12 s_1AD76Y_251 SNP 3.37 (cM) Automated name-based View Maps
s_1EO8V5_710 SNP 5.62 Quercus petraea - Genetic_Qs29_2015 - LG12 s_1EO8V5_710 SNP 8.79 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG12 s_1EO8V5_710 SNP 7.73 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1EO8V5_710 SNP 7.10 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG12 s_1EO8V5_710 SNP 7.11 (cM) Automated name-based View Maps
s_1A3OWO_492 SNP 5.06 Quercus petraea - Genetic_Qs28f_2015 - LG12 s_1A3OWO_492 SNP 8.02 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1A3OWO_492 SNP 7.10 (cM) Automated name-based View Maps
s_2GRLOB_525 SNP 7.30 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_2GRLOB_525 SNP 9.60 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG12 s_2GRLOB_525 SNP 11.43 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG12 s_2GRLOB_525 SNP 10.19 (cM) Automated name-based View Maps
s_1AQSTJ_1140 SNP 7.30 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1AQSTJ_1140 SNP 9.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG12 s_1AQSTJ_1140 SNP 10.81 (cM) Automated name-based View Maps
s_1ALS72_321 SNP 7.30 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1ALS72_321 SNP 9.60 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG12 s_1ALS72_321 SNP 10.02 (cM) Automated name-based View Maps
v_10140_119 SNP 9.55 Quercus robur - Genetic_x3P_2015 - LG12 v_10140_119 SNP 11.74 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 v_10140_119 SNP 12.20 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG12 v_10140_119 SNP 11.74 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG12 v_10140_119 SNP 12.30 (cM) Automated name-based View Maps
s_1DCSF0_381 SNP 10.12 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1DCSF0_381 SNP 13.10 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG12 s_1DCSF0_381 SNP 12.66 (cM) Automated name-based View Maps
s_1CKC51_1213 SNP 10.12 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1CKC51_1213 SNP 14.40 (cM) Automated name-based View Maps
s_1BKA82_890 SNP 10.68 Quercus petraea - Genetic_Qs28f_2015 - LG12 s_1BKA82_890 SNP 14.02 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1BKA82_890 SNP 15.00 (cM) Automated name-based View Maps
v_838_303 SNP 11.24 Quercus robur - Genetic_x11P1_2015 - LG12 v_838_303 SNP 14.63 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG12 v_838_303 SNP 12.30 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 v_838_303 SNP 15.30 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG12 v_838_303 SNP 14.30 (cM) Automated name-based View Maps
s_1BTF2S_648 SNP 11.24 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1BTF2S_648 SNP 15.70 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG12 s_1BTF2S_648 SNP 14.59 (cM) Automated name-based View Maps
s_1BO7ME_895 SNP 11.80 Quercus petraea - Genetic_Qs28f_2015 - LG12 s_1BO7ME_895 SNP 15.73 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG12 s_1BO7ME_895 SNP 15.44 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1BO7ME_895 SNP 16.80 (cM) Automated name-based View Maps
v_AD21YG04_51 SNP 11.80 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 v_AD21YG04_51 SNP 16.90 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG12 v_AD21YG04_51 SNP 15.73 (cM) Automated name-based View Maps
s_1APYOC_629 SNP 11.80 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1APYOC_629 SNP 17.20 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG12 s_1APYOC_629 SNP 17.57 (cM) Automated name-based View Maps
s_2F2FOX_373 SNP 12.36 Quercus petraea - Genetic_Qs28f_2015 - LG12 s_2F2FOX_373 SNP 16.88 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG12 s_2F2FOX_373 SNP 16.69 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_2F2FOX_373 SNP 17.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG12 s_2F2FOX_373 SNP 16.06 (cM) Automated name-based View Maps
v_13555_231 SNP 12.36 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 v_13555_231 SNP 17.40 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG12 v_13555_231 SNP 16.59 (cM) Automated name-based View Maps

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