CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus petraea-Genetic_Qs29_2015  (Reference Set)
Min. Correspondence
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Maps LG3
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Magnification
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 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus petraea - Genetic_Qs29_2015 [ View Map Set Info ]
Map Name: LG3
Map Start: 0.00 cM
Map Stop: 70.28 cM
Features by Type:
66 SNP
66 Total

Map Features

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Items 1 to 25 of 66.       of 3 | Next
Quercus petraea - Genetic_Qs29_2015 - LG3
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
v_12115_159 SNP 0.00 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 v_12115_159 SNP 0.00 (cM) Automated name-based View Maps
s_1A7FVH_488 SNP 0.00 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1A7FVH_488 SNP 3.70 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG3 s_1A7FVH_488 SNP 0.57 (cM) Automated name-based View Maps
s_1CHP3O_651 SNP 0.88 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1CHP3O_651 SNP 4.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG3 s_1CHP3O_651 SNP 1.85 (cM) Automated name-based View Maps
s_1C9UJS_822 SNP 5.28 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1C9UJS_822 SNP 5.30 (cM) Automated name-based View Maps
v_12310_201 SNP 6.15 Quercus petraea - Genetic_Qs28m_2015 - LG3 v_12310_201 SNP 2.81 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG3 v_12310_201 SNP 2.29 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG3 v_12310_201 SNP 2.29 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG3 v_12310_201 SNP 1.75 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG3 v_12310_201 SNP 2.78 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 v_12310_201 SNP 6.20 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG3 v_12310_201 SNP 1.12 (cM) Automated name-based View Maps
s_1ANJ81_617 SNP 6.15 Quercus petraea - Genetic_Qs28f_2015 - LG3 s_1ANJ81_617 SNP 2.29 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1ANJ81_617 SNP 6.20 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG3 s_1ANJ81_617 SNP 2.81 (cM) Automated name-based View Maps
s_1AKUXV_337 SNP 7.03 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1AKUXV_337 SNP 6.80 (cM) Automated name-based View Maps
s_1B4DHM_1413 SNP 7.03 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1B4DHM_1413 SNP 7.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG3 s_1B4DHM_1413 SNP 3.94 (cM) Automated name-based View Maps
s_1BKV5S_414 SNP 10.54 Quercus petraea - Genetic_Qs28m_2015 - LG3 s_1BKV5S_414 SNP 5.06 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG3 s_1BKV5S_414 SNP 5.25 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1BKV5S_414 SNP 9.70 (cM) Automated name-based View Maps
v_3772_305 SNP 10.54 Quercus petraea - Genetic_Qs21_2015 - LG3 v_3772_305 SNP 7.43 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 v_3772_305 SNP 10.30 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG3 v_3772_305 SNP 5.25 (cM) Automated name-based View Maps
s_2F1UKY_499 SNP 10.54 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_2F1UKY_499 SNP 10.30 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG3 s_2F1UKY_499 SNP 7.43 (cM) Automated name-based View Maps
s_1A241L_1053 SNP 11.42 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1A241L_1053 SNP 11.20 (cM) Automated name-based View Maps
v_10992_170 SNP 11.42 Quercus robur - Genetic_x11P2_2015 - LG3 v_10992_170 SNP 7.90 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG3 v_10992_170 SNP 4.50 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG3 v_10992_170 SNP 10.58 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 v_10992_170 SNP 11.50 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG3 v_10992_170 SNP 8.03 (cM) Automated name-based View Maps
s_1A5UIG_610 SNP 11.42 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1A5UIG_610 SNP 11.50 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG3 s_1A5UIG_610 SNP 4.50 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG3 s_1A5UIG_610 SNP 10.58 (cM) Automated name-based View Maps
v_80_100 SNP 13.18 Quercus robur - Genetic_A4_2015 - LG3 v_80_100 SNP 7.72 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 v_80_100 SNP 12.80 (cM) Automated name-based View Maps
s_1A1M32_514 SNP 14.05 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1A1M32_514 SNP 13.80 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG3 s_1A1M32_514 SNP 12.87 (cM) Automated name-based View Maps
s_1ARYMU_676 SNP 16.69 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1ARYMU_676 SNP 13.80 (cM) Automated name-based View Maps
s_1CACQH_961 SNP 18.44 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1CACQH_961 SNP 15.10 (cM) Automated name-based View Maps
s_1ANM1Q_1603 SNP 21.96 Quercus petraea - Genetic_Qs28m_2015 - LG3 s_1ANM1Q_1603 SNP 12.93 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1ANM1Q_1603 SNP 15.90 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG3 s_1ANM1Q_1603 SNP 10.81 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG3 s_1ANM1Q_1603 SNP 11.43 (cM) Automated name-based View Maps
s_2GIVPY_569 SNP 23.71 Quercus robur - Genetic_x3P_2015 - LG3 s_2GIVPY_569 SNP 16.06 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_2GIVPY_569 SNP 20.40 (cM) Automated name-based View Maps
s_1ALB2M_1244 SNP 23.71 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1ALB2M_1244 SNP 20.40 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG9 s_1ALB2M_1244 SNP 10.86 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1ALB2M_1244 SNP 12.90 (cM) Automated name-based View Maps
s_1A369Y_568 SNP 23.71 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1A369Y_568 SNP 20.40 (cM) Automated name-based View Maps
s_1A3FL9_892 SNP 24.59 Quercus petraea - Genetic_Qs21_2015 - LG3 s_1A3FL9_892 SNP 20.30 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1A3FL9_892 SNP 21.30 (cM) Automated name-based View Maps
v_3234_477 SNP 25.47 Quercus robur - Genetic_x3P_2015 - LG3 v_3234_477 SNP 17.91 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG3 v_3234_477 SNP 16.67 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 v_3234_477 SNP 22.40 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG3 v_3234_477 SNP 18.01 (cM) Automated name-based View Maps
s_1BPTFH_1011 SNP 25.47 Quercus petraea - Genetic_Qs28m_2015 - LG3 s_1BPTFH_1011 SNP 19.68 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG3 s_1BPTFH_1011 SNP 17.91 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG3 s_1BPTFH_1011 SNP 21.45 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG3 s_1BPTFH_1011 SNP 18.01 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1BPTFH_1011 SNP 22.40 (cM) Automated name-based View Maps

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