CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus petraea-Genetic_Qs29_2015  (Reference Set)
Min. Correspondence
Align Vertically
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Maps LG6
Start
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Magnification
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 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus petraea - Genetic_Qs29_2015 [ View Map Set Info ]
Map Name: LG6
Map Start: 0.00 cM
Map Stop: 67.60 cM
Features by Type:
93 SNP
93 Total

Map Features

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Items 1 to 25 of 93.       of 4 | Next
Quercus petraea - Genetic_Qs29_2015 - LG6
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
s_AU6AN_205 SNP 43.90 Quercus petraea - Genetic_Qs28f_2015 - LG6 s_AU6AN_205 SNP 36.59 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG6 s_AU6AN_205 SNP 30.91 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG6 s_AU6AN_205 SNP 43.60 (cM) Automated name-based View Maps
s_1BYW5Z_909 SNP 0.00 Quercus robur - Genetic_A4_2015 - LG6 s_1BYW5Z_909 SNP 0.31 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG6 s_1BYW5Z_909 SNP 2.60 (cM) Automated name-based View Maps
v_7315_108 SNP 0.00 Quercus petraea - Genetic_Qs21_2015 - LG6 v_7315_108 SNP 0.86 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG6 v_7315_108 SNP 0.31 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG6 v_7315_108 SNP 2.60 (cM) Automated name-based View Maps
v_2726_182 SNP 0.00 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG6 v_2726_182 SNP 2.60 (cM) Automated name-based View Maps
s_1A7L00_1353 SNP 0.00 Quercus petraea - Genetic_Qs21_2015 - LG6 s_1A7L00_1353 SNP 2.57 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG6 s_1A7L00_1353 SNP 3.40 (cM) Automated name-based View Maps
s_1A88X8_1849 SNP 0.88 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG6 s_1A88X8_1849 SNP 4.90 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG6 s_1A88X8_1849 SNP 3.14 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG6 s_1A88X8_1849 SNP 1.54 (cM) Automated name-based View Maps
s_1AVJRY_362 SNP 1.75 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG6 s_1AVJRY_362 SNP 5.70 (cM) Automated name-based View Maps
s_1EYOXN_545 SNP 1.75 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG6 s_1EYOXN_545 SNP 6.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG6 s_1EYOXN_545 SNP 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG6 s_1EYOXN_545 SNP 0.00 (cM) Automated name-based View Maps
v_15889_262 SNP 3.51 Quercus robur - Genetic_A4_2015 - LG6 v_15889_262 SNP 3.09 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG6 v_15889_262 SNP 2.25 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG6 v_15889_262 SNP 1.14 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG6 v_15889_262 SNP 7.80 (cM) Automated name-based View Maps
s_2FPVMD_1146 SNP 3.51 Quercus petraea - Genetic_Qs28m_2015 - LG6 s_2FPVMD_1146 SNP 2.81 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG6 s_2FPVMD_1146 SNP 7.80 (cM) Automated name-based View Maps
s_1A7EB7_275 SNP 3.51 Quercus petraea - Genetic_Qs28f_2015 - LG6 s_1A7EB7_275 SNP 1.43 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG6 s_1A7EB7_275 SNP 8.10 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG6 s_1A7EB7_275 SNP 3.09 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG6 s_1A7EB7_275 SNP 2.63 (cM) Automated name-based View Maps
s_1AMQ8F_1486 SNP 3.51 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG6 s_1AMQ8F_1486 SNP 8.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG6 s_1AMQ8F_1486 SNP 1.69 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG6 s_1AMQ8F_1486 SNP 7.14 (cM) Automated name-based View Maps
s_1AOCUP_158 SNP 5.26 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG6 s_1AOCUP_158 SNP 9.20 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG6 s_1AOCUP_158 SNP 3.93 (cM) Automated name-based View Maps
s_1A2SW_1217 SNP 8.78 Quercus robur - Genetic_A4_2015 - LG6 s_1A2SW_1217 SNP 5.56 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG6 s_1A2SW_1217 SNP 5.06 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG6 s_1A2SW_1217 SNP 10.30 (cM) Automated name-based View Maps
s_2IBBBX_85 SNP 8.78 Quercus petraea - Genetic_Qs28m_2015 - LG6 s_2IBBBX_85 SNP 5.06 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG6 s_2IBBBX_85 SNP 10.30 (cM) Automated name-based View Maps
s_1CHI95_290 SNP 13.18 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG6 s_1CHI95_290 SNP 10.60 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG6 s_1CHI95_290 SNP 5.06 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG6 s_1CHI95_290 SNP 4.00 (cM) Automated name-based View Maps
s_1BUKBH_682 SNP 15.81 Quercus petraea - Genetic_Qs28m_2015 - LG6 s_1BUKBH_682 SNP 5.06 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG6 s_1BUKBH_682 SNP 11.40 (cM) Automated name-based View Maps
v_2508_288 SNP 15.81 Quercus petraea - Genetic_Qs28f_2015 - LG6 v_2508_288 SNP 4.86 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG6 v_2508_288 SNP 6.18 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG6 v_2508_288 SNP 11.40 (cM) Automated name-based View Maps
v_7702_36 SNP 17.57 Quercus robur - Genetic_x11P2_2015 - LG6 v_7702_36 SNP 7.91 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG6 v_7702_36 SNP 14.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG6 v_7702_36 SNP 9.88 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG6 v_7702_36 SNP 8.29 (cM) Automated name-based View Maps
s_1AM960_441 SNP 17.57 Quercus robur - Genetic_A4_2015 - LG6 s_1AM960_441 SNP 9.88 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG6 s_1AM960_441 SNP 10.68 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG6 s_1AM960_441 SNP 8.29 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG6 s_1AM960_441 SNP 14.80 (cM) Automated name-based View Maps
s_1A7WWS_965 SNP 17.57 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG6 s_1A7WWS_965 SNP 14.80 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG6 s_1A7WWS_965 SNP 10.68 (cM) Automated name-based View Maps
s_2HRXGS_286 SNP 20.20 Quercus robur - Genetic_A4_2015 - LG6 s_2HRXGS_286 SNP 10.80 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG6 s_2HRXGS_286 SNP 15.80 (cM) Automated name-based View Maps
s_1AHCLV_584 SNP 20.20 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG6 s_1AHCLV_584 SNP 15.80 (cM) Automated name-based View Maps
s_1AJ4EM_539 SNP 20.20 Quercus petraea - Genetic_Qs28m_2015 - LG6 s_1AJ4EM_539 SNP 10.68 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG6 s_1AJ4EM_539 SNP 15.90 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG6 s_1AJ4EM_539 SNP 11.11 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG6 s_1AJ4EM_539 SNP 9.43 (cM) Automated name-based View Maps
v_4794_184 SNP 22.83 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG6 v_4794_184 SNP 18.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG6 v_4794_184 SNP 10.82 (cM) Automated name-based View Maps

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