CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus robur-Genetic_x11P1_2015  (Reference Set)
Min. Correspondence
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Maps LG3
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 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus robur - Genetic_x11P1_2015 [ View Map Set Info ]
Map Name: LG3
Map Start: 0.00 cM
Map Stop: 48.92 cM
Features by Type:
68 SNP
68 Total

Map Features

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Items 1 to 25 of 68.       of 3 | Next
Quercus robur - Genetic_x11P1_2015 - LG3
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
s_1A31U1_1056 SNP 0.00 Quercus petraea - Genetic_Qs21_2015 - LG3 s_1A31U1_1056 SNP 1.72 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1A31U1_1056 SNP 5.00 (cM) Automated name-based View Maps
s_1AW1WW_424 SNP 0.00 Quercus petraea - Genetic_Qs21_2015 - LG3 s_1AW1WW_424 SNP 2.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1AW1WW_424 SNP 5.10 (cM) Automated name-based View Maps
v_12310_201 SNP 1.12 Quercus robur - Genetic_x11P2_2015 - LG3 v_12310_201 SNP 1.75 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG3 v_12310_201 SNP 2.78 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 v_12310_201 SNP 6.20 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG3 v_12310_201 SNP 2.81 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG3 v_12310_201 SNP 6.15 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG3 v_12310_201 SNP 2.29 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG3 v_12310_201 SNP 2.29 (cM) Automated name-based View Maps
s_1CVCLK_1032 SNP 3.37 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1CVCLK_1032 SNP 8.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG3 s_1CVCLK_1032 SNP 4.94 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG3 s_1CVCLK_1032 SNP 4.39 (cM) Automated name-based View Maps
v_9725_880 SNP 3.37 Quercus robur - Genetic_x11P2_2015 - LG3 v_9725_880 SNP 4.39 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 v_9725_880 SNP 8.40 (cM) Automated name-based View Maps
s_1BA3V1_1014 SNP 3.37 Quercus petraea - Genetic_Qs21_2015 - LG3 s_1BA3V1_1014 SNP 4.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1BA3V1_1014 SNP 8.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG3 s_1BA3V1_1014 SNP 4.39 (cM) Automated name-based View Maps
v_10992_170 SNP 4.50 Quercus petraea - Genetic_Qs29_2015 - LG3 v_10992_170 SNP 11.42 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG3 v_10992_170 SNP 10.58 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 v_10992_170 SNP 11.50 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG3 v_10992_170 SNP 7.90 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG3 v_10992_170 SNP 8.03 (cM) Automated name-based View Maps
s_1A5UIG_610 SNP 4.50 Quercus petraea - Genetic_Qs29_2015 - LG3 s_1A5UIG_610 SNP 11.42 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1A5UIG_610 SNP 11.50 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG3 s_1A5UIG_610 SNP 10.58 (cM) Automated name-based View Maps
s_1A55U_323 SNP 5.62 Quercus robur - Genetic_x11P2_2015 - LG3 s_1A55U_323 SNP 9.65 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG3 s_1A55U_323 SNP 10.81 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG3 s_1A55U_323 SNP 11.43 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1A55U_323 SNP 15.90 (cM) Automated name-based View Maps
s_1AUGX9_741 SNP 5.62 Quercus robur - Genetic_A4_2015 - LG3 s_1AUGX9_741 SNP 10.81 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG3 s_1AUGX9_741 SNP 10.53 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1AUGX9_741 SNP 15.90 (cM) Automated name-based View Maps
s_1A3TS1_1090 SNP 7.87 Quercus robur - Genetic_x3P_2015 - LG3 s_1A3TS1_1090 SNP 15.44 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG3 s_1A3TS1_1090 SNP 11.41 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG3 s_1A3TS1_1090 SNP 17.16 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1A3TS1_1090 SNP 18.10 (cM) Automated name-based View Maps
s_1A8ZG3_311 SNP 7.87 Quercus robur - Genetic_x11P2_2015 - LG3 s_1A8ZG3_311 SNP 11.41 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1A8ZG3_311 SNP 18.10 (cM) Automated name-based View Maps
s_1ALXBH_897 SNP 7.87 Quercus robur - Genetic_x11P2_2015 - LG3 s_1ALXBH_897 SNP 11.41 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1ALXBH_897 SNP 18.10 (cM) Automated name-based View Maps
s_1COSV1_1036 SNP 8.99 Quercus petraea - Genetic_Qs28f_2015 - LG3 s_1COSV1_1036 SNP 14.86 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG3 s_1COSV1_1036 SNP 16.06 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG3 s_1COSV1_1036 SNP 13.16 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG3 s_1COSV1_1036 SNP 16.31 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1COSV1_1036 SNP 19.40 (cM) Automated name-based View Maps
s_2FLSY3_176 SNP 8.99 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_2FLSY3_176 SNP 20.10 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG3 s_2FLSY3_176 SNP 14.92 (cM) Automated name-based View Maps
s_1A126D_1292 SNP 12.37 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1A126D_1292 SNP 22.80 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG3 s_1A126D_1292 SNP 17.55 (cM) Automated name-based View Maps
s_1A2E5Y_750 SNP 15.74 Quercus robur - Genetic_x3P_2015 - LG3 s_1A2E5Y_750 SNP 20.07 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG3 s_1A2E5Y_750 SNP 20.18 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1A2E5Y_750 SNP 25.40 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG3 s_1A2E5Y_750 SNP 24.30 (cM) Automated name-based View Maps
s_1CHKKZ_158 SNP 15.74 Quercus petraea - Genetic_Qs21_2015 - LG3 s_1CHKKZ_158 SNP 24.30 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG3 s_1CHKKZ_158 SNP 20.69 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1CHKKZ_158 SNP 25.70 (cM) Automated name-based View Maps
s_1CHQRZ_904 SNP 16.31 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1CHQRZ_904 SNP 26.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG3 s_1CHQRZ_904 SNP 22.82 (cM) Automated name-based View Maps
s_1BPBT0_611 SNP 17.43 Quercus petraea - Genetic_Qs29_2015 - LG3 s_1BPBT0_611 SNP 36.90 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG3 s_1BPBT0_611 SNP 25.16 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1BPBT0_611 SNP 27.70 (cM) Automated name-based View Maps
s_1A8O81_1032 SNP 17.99 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1A8O81_1032 SNP 28.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG3 s_1A8O81_1032 SNP 25.16 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG3 s_1A8O81_1032 SNP 23.78 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG3 s_1A8O81_1032 SNP 22.82 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG3 s_1A8O81_1032 SNP 36.90 (cM) Automated name-based View Maps
v_11308_193 SNP 21.37 Quercus petraea - Genetic_Qs21_2015 - LG3 v_11308_193 SNP 28.31 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG3 v_11308_193 SNP 26.26 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG3 v_11308_193 SNP 28.10 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 v_11308_193 SNP 31.40 (cM) Automated name-based View Maps
s_1BUTS0_231 SNP 21.37 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1BUTS0_231 SNP 31.80 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG3 s_1BUTS0_231 SNP 27.80 (cM) Automated name-based View Maps
s_2H4XFP_397 SNP 21.93 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_2H4XFP_397 SNP 32.30 (cM) Automated name-based View Maps
s_1AKHT3_412 SNP 22.49 Quercus petraea - Genetic_Qs21_2015 - LG3 s_1AKHT3_412 SNP 34.03 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG3 s_1AKHT3_412 SNP 29.80 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG3 s_1AKHT3_412 SNP 24.86 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1AKHT3_412 SNP 34.20 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG3 s_1AKHT3_412 SNP 29.85 (cM) Automated name-based View Maps

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