CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus robur-Genetic_x11P1_2015  (Reference Set)
Min. Correspondence
Align Vertically
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Maps LG10
Start
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Magnification
Flipped



 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus robur - Genetic_x11P1_2015 [ View Map Set Info ]
Map Name: LG10
Map Start: 0.00 cM
Map Stop: 56.25 cM
Features by Type:
88 SNP
88 Total

Map Features

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Items 1 to 25 of 88.       of 4 | Next
Quercus robur - Genetic_x11P1_2015 - LG10
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
v_13197_167 SNP 0.00 Quercus robur - Genetic_x3P_2015 - LG10 v_13197_167 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG10 v_13197_167 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 v_13197_167 SNP 0.60 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG10 v_13197_167 SNP 0.00 (cM) Automated name-based View Maps
s_1A0UNW_1062 SNP 0.00 Quercus robur - Genetic_x11P2_2015 - LG10 s_1A0UNW_1062 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG10 s_1A0UNW_1062 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1A0UNW_1062 SNP 0.60 (cM) Automated name-based View Maps
s_1DID0F_368 SNP 0.56 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1DID0F_368 SNP 0.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG10 s_1DID0F_368 SNP 0.93 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG10 s_1DID0F_368 SNP 0.00 (cM) Automated name-based View Maps
s_1AF1T8_626 SNP 1.69 Quercus petraea - Genetic_Qs28f_2015 - LG10 s_1AF1T8_626 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG10 s_1AF1T8_626 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1AF1T8_626 SNP 0.90 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG10 s_1AF1T8_626 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG10 s_1AF1T8_626 SNP 1.24 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG10 s_1AF1T8_626 SNP 0.29 (cM) Automated name-based View Maps
s_1AEYOE_201 SNP 1.69 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1AEYOE_201 SNP 1.20 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG10 s_1AEYOE_201 SNP 0.62 (cM) Automated name-based View Maps
s_1AI7TR_497 SNP 2.25 Quercus robur - Genetic_x11P2_2015 - LG10 s_1AI7TR_497 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1AI7TR_497 SNP 1.80 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG10 s_1AI7TR_497 SNP 3.40 (cM) Automated name-based View Maps
s_AP7PO_499 SNP 3.37 Quercus petraea - Genetic_Qs21_2015 - LG10 s_AP7PO_499 SNP 2.57 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG10 s_AP7PO_499 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_AP7PO_499 SNP 2.60 (cM) Automated name-based View Maps
s_1CGYZD_301 SNP 4.50 Quercus robur - Genetic_x11P2_2015 - LG10 s_1CGYZD_301 SNP 2.63 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1CGYZD_301 SNP 3.80 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG10 s_1CGYZD_301 SNP 3.14 (cM) Automated name-based View Maps
s_2G9TBH_851 SNP 5.62 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_2G9TBH_851 SNP 4.90 (cM) Automated name-based View Maps
s_1A0T7I_639 SNP 7.87 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1A0T7I_639 SNP 7.10 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG10 s_1A0T7I_639 SNP 4.39 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG10 s_1A0T7I_639 SNP 5.87 (cM) Automated name-based View Maps
s_1A1ZO_1322 SNP 7.87 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1A1ZO_1322 SNP 7.10 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG10 s_1A1ZO_1322 SNP 4.39 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG10 s_1A1ZO_1322 SNP 7.72 (cM) Automated name-based View Maps
s_2F4LF_454 SNP 7.87 Quercus robur - Genetic_x3P_2015 - LG10 s_2F4LF_454 SNP 8.34 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_2F4LF_454 SNP 7.10 (cM) Automated name-based View Maps
v_8006_228 SNP 7.87 Quercus petraea - Genetic_Qs28m_2015 - LG10 v_8006_228 SNP 6.18 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG10 v_8006_228 SNP 8.34 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG10 v_8006_228 SNP 6.58 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 v_8006_228 SNP 7.10 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG10 v_8006_228 SNP 10.54 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG10 v_8006_228 SNP 4.39 (cM) Automated name-based View Maps
v_11502_167 SNP 7.87 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 v_11502_167 SNP 7.10 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG10 v_11502_167 SNP 7.15 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG10 v_11502_167 SNP 4.39 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG10 v_11502_167 SNP 8.34 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG10 v_11502_167 SNP 5.87 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG10 v_11502_167 SNP 6.18 (cM) Automated name-based View Maps
s_1A46KY_1625 SNP 10.12 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1A46KY_1625 SNP 9.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG10 s_1A46KY_1625 SNP 8.65 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG10 s_1A46KY_1625 SNP 5.27 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG10 s_1A46KY_1625 SNP 8.60 (cM) Automated name-based View Maps
s_1BE2N0_291 SNP 10.12 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1BE2N0_291 SNP 9.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG10 s_1BE2N0_291 SNP 5.27 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG10 s_1BE2N0_291 SNP 8.60 (cM) Automated name-based View Maps
s_AE01BE5WC_1029 SNP 10.12 Quercus robur - Genetic_x11P2_2015 - LG10 s_AE01BE5WC_1029 SNP 6.14 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG10 s_AE01BE5WC_1029 SNP 11.44 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG10 s_AE01BE5WC_1029 SNP 12.04 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_AE01BE5WC_1029 SNP 10.80 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG10 s_AE01BE5WC_1029 SNP 9.55 (cM) Automated name-based View Maps
v_15000_157 SNP 11.24 Quercus robur - Genetic_x11P2_2015 - LG10 v_15000_157 SNP 9.66 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 v_15000_157 SNP 11.80 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG10 v_15000_157 SNP 11.43 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG10 v_15000_157 SNP 10.02 (cM) Automated name-based View Maps
s_1A6FDU_492 SNP 11.80 Quercus petraea - Genetic_Qs21_2015 - LG10 s_1A6FDU_492 SNP 10.88 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG10 s_1A6FDU_492 SNP 12.66 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1A6FDU_492 SNP 12.70 (cM) Automated name-based View Maps
s_1AH4M5_485 SNP 12.93 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1AH4M5_485 SNP 13.80 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG10 s_1AH4M5_485 SNP 14.93 (cM) Automated name-based View Maps
s_1B9HSX_732 SNP 13.49 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1B9HSX_732 SNP 14.40 (cM) Automated name-based View Maps
s_1BGHNK_260 SNP 14.61 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1BGHNK_260 SNP 15.80 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG10 s_1BGHNK_260 SNP 18.44 (cM) Automated name-based View Maps
s_1A937_1276 SNP 14.61 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 s_1A937_1276 SNP 15.80 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG10 s_1A937_1276 SNP 18.44 (cM) Automated name-based View Maps
v_4159_306 SNP 14.61 Quercus petraea - Genetic_Qs21_2015 - LG10 v_4159_306 SNP 13.45 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG10 v_4159_306 SNP 15.74 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG10 v_4159_306 SNP 19.31 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 v_4159_306 SNP 16.40 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG10 v_4159_306 SNP 19.38 (cM) Automated name-based View Maps
v_14030_189 SNP 15.17 Quercus petraea - Genetic_Qs21_2015 - LG10 v_14030_189 SNP 13.45 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P2_2015 - LG10 v_14030_189 SNP 19.31 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG10 v_14030_189 SNP 19.38 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG10 v_14030_189 SNP 15.74 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG10 v_14030_189 SNP 16.40 (cM) Automated name-based View Maps

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