CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus robur-Genetic_x11P2_2015  (Reference Set)
Min. Correspondence
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Maps LG2
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 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus robur - Genetic_x11P2_2015 [ View Map Set Info ]
Map Name: LG2
Map Start: 0.00 cM
Map Stop: 96.55 cM
Features by Type:
247 SNP
247 Total

Map Features

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Items 1 to 25 of 247.       of 10 | Next
Quercus robur - Genetic_x11P2_2015 - LG2
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
v_11847_197 SNP 71.09 Quercus petraea - Genetic_Qs28f_2015 - LG2 v_11847_197 SNP 59.16 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG2 v_11847_197 SNP 80.78 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 v_11847_197 SNP 70.50 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG2 v_11847_197 SNP 67.92 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG2 v_11847_197 SNP 64.65 (cM) Automated name-based View Maps
s_1A9VEF_1737 SNP 0.00 Quercus robur - Genetic_A4_2015 - LG2 s_1A9VEF_1737 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG2 s_1A9VEF_1737 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1A9VEF_1737 SNP 0.00 (cM) Automated name-based View Maps
s_1A76ZA_1744 SNP 0.00 Quercus robur - Genetic_x11P1_2015 - LG2 s_1A76ZA_1744 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1A76ZA_1744 SNP 0.60 (cM) Automated name-based View Maps
v_1917_189 SNP 0.00 Quercus robur - Genetic_x11P1_2015 - LG2 v_1917_189 SNP 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG2 v_1917_189 SNP 0.29 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG2 v_1917_189 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 v_1917_189 SNP 0.70 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG2 v_1917_189 SNP 1.69 (cM) Automated name-based View Maps
s_1ATR24_545 SNP 0.00 Quercus petraea - Genetic_Qs28f_2015 - LG2 s_1ATR24_545 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1ATR24_545 SNP 1.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG2 s_1ATR24_545 SNP 1.24 (cM) Automated name-based View Maps
s_1A48U1_307 SNP 2.63 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1A48U1_307 SNP 1.90 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG2 s_1A48U1_307 SNP 1.85 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG2 s_1A48U1_307 SNP 0.86 (cM) Automated name-based View Maps
s_1A4BEL_1084 SNP 2.63 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1A4BEL_1084 SNP 1.90 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG2 s_1A4BEL_1084 SNP 1.85 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG2 s_1A4BEL_1084 SNP 0.56 (cM) Automated name-based View Maps
s_1B0S44_444 SNP 3.51 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1B0S44_444 SNP 1.90 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1B0S44_444 SNP 1.70 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG9 s_1B0S44_444 SNP 3.40 (cM) Automated name-based View Maps
s_1BES6B_1008 SNP 5.27 Quercus petraea - Genetic_Qs28f_2015 - LG2 s_1BES6B_1008 SNP 1.71 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1BES6B_1008 SNP 2.70 (cM) Automated name-based View Maps
s_1AKX5L_342 SNP 6.14 Quercus petraea - Genetic_Qs21_2015 - LG2 s_1AKX5L_342 SNP 3.71 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG2 s_1AKX5L_342 SNP 1.69 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1AKX5L_342 SNP 3.50 (cM) Automated name-based View Maps
v_49_504 SNP 6.14 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 v_49_504 SNP 3.60 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG2 v_49_504 SNP 6.18 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG2 v_49_504 SNP 3.09 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG2 v_49_504 SNP 1.75 (cM) Automated name-based View Maps
s_1CDH09_311 SNP 6.14 Quercus robur - Genetic_A4_2015 - LG2 s_1CDH09_311 SNP 3.40 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG2 s_1CDH09_311 SNP 2.57 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1CDH09_311 SNP 3.60 (cM) Automated name-based View Maps
s_2IXCCB_597 SNP 7.90 Quercus robur - Genetic_x11P1_2015 - LG2 s_2IXCCB_597 SNP 2.25 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_2IXCCB_597 SNP 4.10 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG2 s_2IXCCB_597 SNP 4.01 (cM) Automated name-based View Maps
s_2I25L3_821 SNP 7.90 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_2I25L3_821 SNP 4.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG2 s_2I25L3_821 SNP 2.81 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG2 s_2I25L3_821 SNP 4.01 (cM) Automated name-based View Maps
s_2HO70E_1069 SNP 7.90 Quercus robur - Genetic_A4_2015 - LG2 s_2HO70E_1069 SNP 4.63 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_2HO70E_1069 SNP 4.80 (cM) Automated name-based View Maps
v_9806_117 SNP 7.90 Quercus petraea - Genetic_Qs29_2015 - LG2 v_9806_117 SNP 2.63 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG2 v_9806_117 SNP 4.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 v_9806_117 SNP 5.30 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG2 v_9806_117 SNP 7.30 (cM) Automated name-based View Maps
s_1BRVIG_130 SNP 9.65 Quercus robur - Genetic_x11P1_2015 - LG2 s_1BRVIG_130 SNP 5.06 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1BRVIG_130 SNP 5.90 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG2 s_1BRVIG_130 SNP 2.63 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG2 s_1BRVIG_130 SNP 5.25 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG2 s_1BRVIG_130 SNP 7.30 (cM) Automated name-based View Maps
v_6854_106 SNP 9.65 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 v_6854_106 SNP 6.90 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG2 v_6854_106 SNP 5.62 (cM) Automated name-based View Maps
s_1AD54R_1446 SNP 11.41 Quercus petraea - Genetic_Qs28f_2015 - LG2 s_1AD54R_1446 SNP 6.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1AD54R_1446 SNP 7.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG2 s_1AD54R_1446 SNP 7.41 (cM) Automated name-based View Maps
s_1AIGXE_599 SNP 14.04 Quercus robur - Genetic_x3P_2015 - LG2 s_1AIGXE_599 SNP 8.95 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG2 s_1AIGXE_599 SNP 6.74 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1AIGXE_599 SNP 9.70 (cM) Automated name-based View Maps
s_1AQA4Z_1644 SNP 16.68 Quercus robur - Genetic_A4_2015 - LG2 s_1AQA4Z_1644 SNP 11.11 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1AQA4Z_1644 SNP 12.30 (cM) Automated name-based View Maps
s_1DNAXC_509 SNP 16.68 Quercus robur - Genetic_x11P1_2015 - LG2 s_1DNAXC_509 SNP 9.55 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1DNAXC_509 SNP 12.80 (cM) Automated name-based View Maps
s_1AH1MU_1264 SNP 17.55 Quercus robur - Genetic_x11P1_2015 - LG2 s_1AH1MU_1264 SNP 10.68 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1AH1MU_1264 SNP 13.80 (cM) Automated name-based View Maps
s_1BJRW2_723 SNP 18.43 Quercus petraea - Genetic_Qs28f_2015 - LG2 s_1BJRW2_723 SNP 10.29 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG2 s_1BJRW2_723 SNP 12.97 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1BJRW2_723 SNP 14.00 (cM) Automated name-based View Maps
s_1B0H8U_259 SNP 18.43 Quercus robur - Genetic_A4_2015 - LG2 s_1B0H8U_259 SNP 12.35 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG2 s_1B0H8U_259 SNP 10.68 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG2 s_1B0H8U_259 SNP 14.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG2 s_1B0H8U_259 SNP 16.01 (cM) Automated name-based View Maps

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