CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus robur-Genetic_x11P2_2015  (Reference Set)
Min. Correspondence
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Maps LG3
Start
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Magnification
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 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus robur - Genetic_x11P2_2015 [ View Map Set Info ]
Map Name: LG3
Map Start: 0.00 cM
Map Stop: 59.71 cM
Features by Type:
84 SNP
84 Total

Map Features

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Items 1 to 25 of 84.       of 4 | Next
Quercus robur - Genetic_x11P2_2015 - LG3
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
v_11385_200 SNP 8.78 Quercus robur - Genetic_x3P_2015 - LG3 v_11385_200 SNP 8.65 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 v_11385_200 SNP 12.10 (cM) Automated name-based View Maps
s_2H5OA4_379 SNP 0.00 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_2H5OA4_379 SNP 3.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG3 s_2H5OA4_379 SNP 0.00 (cM) Automated name-based View Maps
s_1AP4NA_371 SNP 0.00 Quercus robur - Genetic_A4_2015 - LG3 s_1AP4NA_371 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1AP4NA_371 SNP 3.40 (cM) Automated name-based View Maps
s_2F1E04_607 SNP 0.00 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_2F1E04_607 SNP 5.10 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG3 s_2F1E04_607 SNP 1.72 (cM) Automated name-based View Maps
s_1AW4ZD_502 SNP 0.88 Quercus petraea - Genetic_Qs28f_2015 - LG3 s_1AW4ZD_502 SNP 2.29 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1AW4ZD_502 SNP 5.90 (cM) Automated name-based View Maps
v_12310_201 SNP 1.75 Quercus robur - Genetic_A4_2015 - LG3 v_12310_201 SNP 2.78 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG3 v_12310_201 SNP 2.29 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 v_12310_201 SNP 6.20 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG3 v_12310_201 SNP 2.81 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG3 v_12310_201 SNP 6.15 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG3 v_12310_201 SNP 2.29 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG3 v_12310_201 SNP 1.12 (cM) Automated name-based View Maps
s_1CVCLK_1032 SNP 4.39 Quercus robur - Genetic_x3P_2015 - LG3 s_1CVCLK_1032 SNP 4.94 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1CVCLK_1032 SNP 8.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG3 s_1CVCLK_1032 SNP 3.37 (cM) Automated name-based View Maps
v_9725_880 SNP 4.39 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 v_9725_880 SNP 8.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG3 v_9725_880 SNP 3.37 (cM) Automated name-based View Maps
s_1BA3V1_1014 SNP 4.39 Quercus robur - Genetic_x11P1_2015 - LG3 s_1BA3V1_1014 SNP 3.37 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG3 s_1BA3V1_1014 SNP 4.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1BA3V1_1014 SNP 8.40 (cM) Automated name-based View Maps
s_1CXNYP_1722 SNP 5.27 Quercus robur - Genetic_x3P_2015 - LG3 s_1CXNYP_1722 SNP 7.72 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1CXNYP_1722 SNP 10.20 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG3 s_1CXNYP_1722 SNP 6.00 (cM) Automated name-based View Maps
s_1C494G_1096 SNP 7.02 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1C494G_1096 SNP 11.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG3 s_1C494G_1096 SNP 6.57 (cM) Automated name-based View Maps
s_1A39ML_1285 SNP 7.02 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1A39ML_1285 SNP 11.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG3 s_1A39ML_1285 SNP 6.86 (cM) Automated name-based View Maps
v_10992_170 SNP 7.90 Quercus robur - Genetic_x3P_2015 - LG3 v_10992_170 SNP 8.03 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG3 v_10992_170 SNP 10.58 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 v_10992_170 SNP 11.50 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG3 v_10992_170 SNP 4.50 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG3 v_10992_170 SNP 11.42 (cM) Automated name-based View Maps
s_2HC6X3_131 SNP 8.78 Quercus robur - Genetic_A4_2015 - LG3 s_2HC6X3_131 SNP 7.72 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_2HC6X3_131 SNP 12.80 (cM) Automated name-based View Maps
s_1BDH6Y_511 SNP 8.78 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1BDH6Y_511 SNP 12.80 (cM) Automated name-based View Maps
s_1AVTEE_642 SNP 8.78 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1AVTEE_642 SNP 12.80 (cM) Automated name-based View Maps
s_1AXVA1_312 SNP 8.78 Quercus petraea - Genetic_Qs28f_2015 - LG3 s_1AXVA1_312 SNP 8.86 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1AXVA1_312 SNP 12.80 (cM) Automated name-based View Maps
s_1A55U_323 SNP 9.65 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1A55U_323 SNP 15.90 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG3 s_1A55U_323 SNP 5.62 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG3 s_1A55U_323 SNP 10.81 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG3 s_1A55U_323 SNP 11.43 (cM) Automated name-based View Maps
s_1AUGX9_741 SNP 10.53 Quercus robur - Genetic_x11P1_2015 - LG3 s_1AUGX9_741 SNP 5.62 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG3 s_1AUGX9_741 SNP 10.81 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1AUGX9_741 SNP 15.90 (cM) Automated name-based View Maps
s_1B6J2V_665 SNP 11.41 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1B6J2V_665 SNP 17.60 (cM) Automated name-based View Maps
s_1ADUV4_406 SNP 11.41 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1ADUV4_406 SNP 17.60 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG3 s_1ADUV4_406 SNP 13.15 (cM) Automated name-based View Maps
s_1A3TS1_1090 SNP 11.41 Quercus robur - Genetic_x11P1_2015 - LG3 s_1A3TS1_1090 SNP 7.87 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG3 s_1A3TS1_1090 SNP 17.16 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG3 s_1A3TS1_1090 SNP 15.44 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1A3TS1_1090 SNP 18.10 (cM) Automated name-based View Maps
s_1A8ZG3_311 SNP 11.41 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1A8ZG3_311 SNP 18.10 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG3 s_1A8ZG3_311 SNP 7.87 (cM) Automated name-based View Maps
s_1ALXBH_897 SNP 11.41 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1ALXBH_897 SNP 18.10 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG3 s_1ALXBH_897 SNP 7.87 (cM) Automated name-based View Maps
s_1AIIB4_453 SNP 12.29 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG3 s_1AIIB4_453 SNP 18.50 (cM) Automated name-based View Maps

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