CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus robur-Genetic_x11P2_2015  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG4
Start
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Magnification
Flipped



 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus robur - Genetic_x11P2_2015 [ View Map Set Info ]
Map Name: LG4
Map Start: 0.00 cM
Map Stop: 57.10 cM
Features by Type:
69 SNP
69 Total

Map Features

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Items 1 to 25 of 69.       of 3 | Next
Quercus robur - Genetic_x11P2_2015 - LG4
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
s_1DY96Q_819 SNP 0.00 Quercus petraea - Genetic_Qs28f_2015 - LG4 s_1DY96Q_819 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1DY96Q_819 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG4 s_1DY96Q_819 SNP 0.00 (cM) Automated name-based View Maps
s_EOZRA_191 SNP 0.88 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_EOZRA_191 SNP 1.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG4 s_EOZRA_191 SNP 0.00 (cM) Automated name-based View Maps
s_1B54MC_944 SNP 0.88 Quercus petraea - Genetic_Qs21_2015 - LG4 s_1B54MC_944 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1B54MC_944 SNP 1.20 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG4 s_1B54MC_944 SNP 0.93 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG4 s_1B54MC_944 SNP 0.56 (cM) Automated name-based View Maps
s_1AEUAK_82 SNP 0.88 Quercus robur - Genetic_x11P1_2015 - LG4 s_1AEUAK_82 SNP 0.56 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG4 s_1AEUAK_82 SNP 1.85 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1AEUAK_82 SNP 1.50 (cM) Automated name-based View Maps
v_10208_216 SNP 2.63 Quercus robur - Genetic_x11P1_2015 - LG4 v_10208_216 SNP 1.68 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 v_10208_216 SNP 2.50 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG4 v_10208_216 SNP 2.47 (cM) Automated name-based View Maps
s_2G3GM3_325 SNP 2.63 Quercus robur - Genetic_x11P1_2015 - LG4 s_2G3GM3_325 SNP 1.12 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_2G3GM3_325 SNP 2.50 (cM) Automated name-based View Maps
s_2F4JLS_807 SNP 2.63 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_2F4JLS_807 SNP 2.50 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG4 s_2F4JLS_807 SNP 2.86 (cM) Automated name-based View Maps
s_1CTGJ0_718 SNP 3.51 Quercus robur - Genetic_x11P1_2015 - LG4 s_1CTGJ0_718 SNP 1.68 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1CTGJ0_718 SNP 3.20 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG4 s_1CTGJ0_718 SNP 2.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG4 s_1CTGJ0_718 SNP 2.16 (cM) Automated name-based View Maps
s_1B9AWY_460 SNP 2.63 Quercus robur - Genetic_A4_2015 - LG4 s_1B9AWY_460 SNP 2.16 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG4 s_1B9AWY_460 SNP 4.86 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1B9AWY_460 SNP 3.20 (cM) Automated name-based View Maps
v_12520_283 SNP 3.51 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 v_12520_283 SNP 3.20 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG4 v_12520_283 SNP 1.68 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG4 v_12520_283 SNP 2.86 (cM) Automated name-based View Maps
s_1B5WK9_282 SNP 3.51 Quercus robur - Genetic_x11P1_2015 - LG4 s_1B5WK9_282 SNP 2.25 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1B5WK9_282 SNP 3.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG4 s_1B5WK9_282 SNP 2.16 (cM) Automated name-based View Maps
s_1AWU7M_1577 SNP 3.51 Quercus petraea - Genetic_Qs28f_2015 - LG4 s_1AWU7M_1577 SNP 8.29 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1AWU7M_1577 SNP 3.80 (cM) Automated name-based View Maps
s_1DKQJR_226 SNP 5.26 Quercus robur - Genetic_x11P1_2015 - LG4 s_1DKQJR_226 SNP 5.06 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1DKQJR_226 SNP 5.80 (cM) Automated name-based View Maps
s_2FVCUQ_171 SNP 5.26 Quercus petraea - Genetic_Qs28f_2015 - LG4 s_2FVCUQ_171 SNP 10.57 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_2FVCUQ_171 SNP 6.10 (cM) Automated name-based View Maps
s_1AWWMZ_1207 SNP 5.26 Quercus petraea - Genetic_Qs28f_2015 - LG4 s_1AWWMZ_1207 SNP 10.86 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1AWWMZ_1207 SNP 6.10 (cM) Automated name-based View Maps
s_1BTLOU_1291 SNP 6.14 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1BTLOU_1291 SNP 7.00 (cM) Automated name-based View Maps
s_1B91MJ_705 SNP 6.14 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1B91MJ_705 SNP 7.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG4 s_1B91MJ_705 SNP 7.30 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG4 s_1B91MJ_705 SNP 2.16 (cM) Automated name-based View Maps
s_1DGCGG_507 SNP 6.14 Quercus robur - Genetic_x3P_2015 - LG4 s_1DGCGG_507 SNP 8.34 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG4 s_1DGCGG_507 SNP 7.02 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG4 s_1DGCGG_507 SNP 7.30 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1DGCGG_507 SNP 7.60 (cM) Automated name-based View Maps
s_AE01DK6UN_152 SNP 7.02 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_AE01DK6UN_152 SNP 8.50 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG4 s_AE01DK6UN_152 SNP 8.43 (cM) Automated name-based View Maps
v_706_168 SNP 7.02 Quercus petraea - Genetic_Qs28m_2015 - LG4 v_706_168 SNP 13.50 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG4 v_706_168 SNP 14.58 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG4 v_706_168 SNP 8.43 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG4 v_706_168 SNP 7.90 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 v_706_168 SNP 8.50 (cM) Automated name-based View Maps
v_207_133 SNP 8.77 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 v_207_133 SNP 10.30 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG4 v_207_133 SNP 19.44 (cM) Automated name-based View Maps
s_1B1ADU_697 SNP 10.53 Quercus robur - Genetic_x11P1_2015 - LG4 s_1B1ADU_697 SNP 11.80 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1B1ADU_697 SNP 12.00 (cM) Automated name-based View Maps
s_1BGLSD_999 SNP 10.53 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1BGLSD_999 SNP 12.50 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG4 s_1BGLSD_999 SNP 12.36 (cM) Automated name-based View Maps
s_1BNLBG_1000 SNP 12.29 Quercus petraea - Genetic_Qs28f_2015 - LG4 s_1BNLBG_1000 SNP 23.16 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1BNLBG_1000 SNP 13.80 (cM) Automated name-based View Maps
s_1A8J2P_1063 SNP 13.16 Quercus petraea - Genetic_Qs28f_2015 - LG4 s_1A8J2P_1063 SNP 24.59 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG4 s_1A8J2P_1063 SNP 15.00 (cM) Automated name-based View Maps

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