CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus robur-Genetic_x11P2_2015  (Reference Set)
Min. Correspondence
Align Vertically
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Maps LG7
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Magnification
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 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus robur - Genetic_x11P2_2015 [ View Map Set Info ]
Map Name: LG7
Map Start: 0.00 cM
Map Stop: 52.65 cM
Features by Type:
128 SNP
128 Total

Map Features

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Items 1 to 25 of 128.       of 6 | Next
Quercus robur - Genetic_x11P2_2015 - LG7
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
s_1A69R9_277 SNP 0.00 Quercus robur - Genetic_x11P1_2015 - LG7 s_1A69R9_277 SNP 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG7 s_1A69R9_277 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1A69R9_277 SNP 0.00 (cM) Automated name-based View Maps
s_1A0V83_194 SNP 0.88 Quercus petraea - Genetic_Qs28f_2015 - LG7 s_1A0V83_194 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG7 s_1A0V83_194 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG7 s_1A0V83_194 SNP 0.56 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1A0V83_194 SNP 0.90 (cM) Automated name-based View Maps
s_1A1W90_1264 SNP 0.88 Quercus robur - Genetic_x3P_2015 - LG7 s_1A1W90_1264 SNP 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG7 s_1A1W90_1264 SNP 0.29 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG7 s_1A1W90_1264 SNP 0.56 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1A1W90_1264 SNP 0.90 (cM) Automated name-based View Maps
s_1AS3PF_1616 SNP 0.88 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1AS3PF_1616 SNP 1.70 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG7 s_1AS3PF_1616 SNP 1.69 (cM) Automated name-based View Maps
v_15652_53 SNP 1.75 Quercus robur - Genetic_x11P1_2015 - LG7 v_15652_53 SNP 2.25 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 v_15652_53 SNP 2.30 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG7 v_15652_53 SNP 0.00 (cM) Automated name-based View Maps
s_1B1T30_493 SNP 1.75 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1B1T30_493 SNP 2.50 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG7 s_1B1T30_493 SNP 2.25 (cM) Automated name-based View Maps
s_1BBCEE_805 SNP 1.75 Quercus petraea - Genetic_Qs21_2015 - LG7 s_1BBCEE_805 SNP 2.57 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG7 s_1BBCEE_805 SNP 2.25 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1BBCEE_805 SNP 2.50 (cM) Automated name-based View Maps
s_1C5MXM_402 SNP 1.75 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1C5MXM_402 SNP 2.50 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG7 s_1C5MXM_402 SNP 2.25 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG7 s_1C5MXM_402 SNP 2.57 (cM) Automated name-based View Maps
s_1CA282_1167 SNP 1.75 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1CA282_1167 SNP 2.50 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG7 s_1CA282_1167 SNP 2.25 (cM) Automated name-based View Maps
s_1A2FYJ_520 SNP 1.75 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1A2FYJ_520 SNP 4.20 (cM) Automated name-based View Maps
s_1DUHWL_492 SNP 1.75 Quercus robur - Genetic_x11P1_2015 - LG7 s_1DUHWL_492 SNP 5.63 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG7 s_1DUHWL_492 SNP 1.85 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1DUHWL_492 SNP 4.40 (cM) Automated name-based View Maps
s_1B3GKZ_458 SNP 1.75 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1B3GKZ_458 SNP 4.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG7 s_1B3GKZ_458 SNP 5.63 (cM) Automated name-based View Maps
s_1A2G8N_844 SNP 2.63 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1A2G8N_844 SNP 5.10 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG7 s_1A2G8N_844 SNP 5.63 (cM) Automated name-based View Maps
s_1AWXW5_368 SNP 2.63 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1AWXW5_368 SNP 5.10 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG7 s_1AWXW5_368 SNP 5.72 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG7 s_1AWXW5_368 SNP 5.63 (cM) Automated name-based View Maps
s_1CG52K_975 SNP 2.63 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1CG52K_975 SNP 5.10 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG7 s_1CG52K_975 SNP 1.71 (cM) Automated name-based View Maps
v_12078_258 SNP 3.51 Quercus robur - Genetic_x11P1_2015 - LG7 v_12078_258 SNP 6.75 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG7 v_12078_258 SNP 3.37 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG7 v_12078_258 SNP 6.58 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG7 v_12078_258 SNP 3.40 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG7 v_12078_258 SNP 2.57 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 v_12078_258 SNP 6.00 (cM) Automated name-based View Maps
s_1B8FLD_1048 SNP 3.51 Quercus robur - Genetic_A4_2015 - LG7 s_1B8FLD_1048 SNP 0.93 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1B8FLD_1048 SNP 6.00 (cM) Automated name-based View Maps
s_1AJPAW_315 SNP 3.51 Quercus robur - Genetic_x11P1_2015 - LG7 s_1AJPAW_315 SNP 6.75 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1AJPAW_315 SNP 6.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG7 s_1AJPAW_315 SNP 0.93 (cM) Automated name-based View Maps
v_12122_184 SNP 3.51 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 v_12122_184 SNP 6.00 (cM) Automated name-based View Maps
s_1B1UIL_116 SNP 3.51 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1B1UIL_116 SNP 6.00 (cM) Automated name-based View Maps
v_11179_306 SNP 7.02 Quercus robur - Genetic_x11P1_2015 - LG7 v_11179_306 SNP 9.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 v_11179_306 SNP 9.50 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG7 v_11179_306 SNP 7.30 (cM) Automated name-based View Maps
s_2HCYWO_875 SNP 7.90 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_2HCYWO_875 SNP 9.70 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG7 s_2HCYWO_875 SNP 8.87 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG7 s_2HCYWO_875 SNP 5.87 (cM) Automated name-based View Maps
s_1A97I_1090 SNP 7.90 Quercus petraea - Genetic_Qs28f_2015 - LG7 s_1A97I_1090 SNP 9.15 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG7 s_1A97I_1090 SNP 3.40 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1A97I_1090 SNP 9.70 (cM) Automated name-based View Maps
s_1BEE6A_248 SNP 7.90 Quercus petraea - Genetic_Qs28f_2015 - LG7 s_1BEE6A_248 SNP 9.44 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1BEE6A_248 SNP 9.70 (cM) Automated name-based View Maps
s_1A03EA_1055 SNP 7.90 Quercus petraea - Genetic_Qs28f_2015 - LG7 s_1A03EA_1055 SNP 9.15 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG7 s_1A03EA_1055 SNP 9.70 (cM) Automated name-based View Maps

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