CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Quercus robur-Genetic_x11P2_2015  (Reference Set)
Min. Correspondence
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Maps LG9
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 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus robur - Genetic_x11P2_2015 [ View Map Set Info ]
Map Name: LG9
Map Start: 0.00 cM
Map Stop: 53.54 cM
Features by Type:
103 SNP
103 Total

Map Features

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Items 1 to 25 of 103.       of 5 | Next
Quercus robur - Genetic_x11P2_2015 - LG9
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
s_2F28T4_553 SNP 0.00 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_2F28T4_553 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG9 s_2F28T4_553 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG9 s_2F28T4_553 SNP 0.00 (cM) Automated name-based View Maps
s_2F1PMY_384 SNP 0.00 Quercus robur - Genetic_x11P1_2015 - LG9 s_2F1PMY_384 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_2F1PMY_384 SNP 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG9 s_2F1PMY_384 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG9 s_2F1PMY_384 SNP 0.00 (cM) Automated name-based View Maps
s_1AE5MB_75 SNP 0.00 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1AE5MB_75 SNP 0.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG9 s_1AE5MB_75 SNP 1.12 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG9 s_1AE5MB_75 SNP 0.31 (cM) Automated name-based View Maps
s_1CFSVB_865 SNP 0.00 Quercus robur - Genetic_A4_2015 - LG9 s_1CFSVB_865 SNP 0.62 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1CFSVB_865 SNP 0.60 (cM) Automated name-based View Maps
s_1A6EDZ_1597 SNP 0.00 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1A6EDZ_1597 SNP 0.90 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG9 s_1A6EDZ_1597 SNP 1.24 (cM) Automated name-based View Maps
s_1A4X34_1309 SNP 0.88 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1A4X34_1309 SNP 1.50 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG9 s_1A4X34_1309 SNP 1.54 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG9 s_1A4X34_1309 SNP 1.69 (cM) Automated name-based View Maps
s_1DNJ9J_1006 SNP 0.88 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1DNJ9J_1006 SNP 1.70 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG9 s_1DNJ9J_1006 SNP 1.69 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG9 s_1DNJ9J_1006 SNP 3.40 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG9 s_1DNJ9J_1006 SNP 3.43 (cM) Automated name-based View Maps
s_1AZOU2_773 SNP 0.88 Quercus petraea - Genetic_Qs28f_2015 - LG9 s_1AZOU2_773 SNP 0.57 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1AZOU2_773 SNP 1.70 (cM) Automated name-based View Maps
s_1A8WLX_1145 SNP 0.88 Quercus robur - Genetic_A4_2015 - LG9 s_1A8WLX_1145 SNP 2.16 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG9 s_1A8WLX_1145 SNP 2.25 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1A8WLX_1145 SNP 2.00 (cM) Automated name-based View Maps
s_1AUOYU_390 SNP 0.88 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1AUOYU_390 SNP 2.10 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG9 s_1AUOYU_390 SNP 4.94 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG9 s_1AUOYU_390 SNP 2.25 (cM) Automated name-based View Maps
s_1BRF38_1690 SNP 2.63 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1BRF38_1690 SNP 3.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG9 s_1BRF38_1690 SNP 3.70 (cM) Automated name-based View Maps
v_7237_179 SNP 2.63 Quercus robur - Genetic_x3P_2015 - LG9 v_7237_179 SNP 6.48 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG9 v_7237_179 SNP 2.57 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG9 v_7237_179 SNP 4.94 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG9 v_7237_179 SNP 2.81 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 v_7237_179 SNP 3.70 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs29_2015 - LG9 v_7237_179 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG9 v_7237_179 SNP 5.62 (cM) Automated name-based View Maps
s_1B015M_1061 SNP 2.63 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1B015M_1061 SNP 4.30 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG9 s_1B015M_1061 SNP 6.48 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG9 s_1B015M_1061 SNP 6.18 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG9 s_1B015M_1061 SNP 3.43 (cM) Automated name-based View Maps
s_1BONE7_428 SNP 2.63 Quercus robur - Genetic_x3P_2015 - LG9 s_1BONE7_428 SNP 8.34 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1BONE7_428 SNP 4.60 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG9 s_1BONE7_428 SNP 3.43 (cM) Automated name-based View Maps
s_1CF300_256 SNP 2.63 Quercus robur - Genetic_x3P_2015 - LG9 s_1CF300_256 SNP 8.34 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG9 s_1CF300_256 SNP 3.43 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1CF300_256 SNP 4.60 (cM) Automated name-based View Maps
s_1AKBB0_560 SNP 2.63 Quercus robur - Genetic_x3P_2015 - LG9 s_1AKBB0_560 SNP 9.57 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1AKBB0_560 SNP 4.60 (cM) Automated name-based View Maps
s_1AH5P5_917 SNP 2.63 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1AH5P5_917 SNP 4.60 (cM) Automated name-based View Maps
s_1AF9VK_685 SNP 2.63 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1AF9VK_685 SNP 5.20 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG9 s_1AF9VK_685 SNP 3.43 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG9 s_1AF9VK_685 SNP 7.87 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG9 s_1AF9VK_685 SNP 7.72 (cM) Automated name-based View Maps
s_1DVZ4J_792 SNP 2.63 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1DVZ4J_792 SNP 5.20 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG9 s_1DVZ4J_792 SNP 7.87 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG9 s_1DVZ4J_792 SNP 7.72 (cM) Automated name-based View Maps
s_1BW3GU_558 SNP 2.63 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1BW3GU_558 SNP 5.20 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG9 s_1BW3GU_558 SNP 4.00 (cM) Automated name-based View Maps
s_AE01EJ938_1402 SNP 3.51 Quercus robur - Genetic_x11P1_2015 - LG9 s_AE01EJ938_1402 SNP 8.43 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG9 s_AE01EJ938_1402 SNP 7.72 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_AE01EJ938_1402 SNP 5.50 (cM) Automated name-based View Maps
s_1B1WY6_565 SNP 6.14 Quercus robur - Genetic_x3P_2015 - LG9 s_1B1WY6_565 SNP 10.19 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG9 s_1B1WY6_565 SNP 9.55 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1B1WY6_565 SNP 6.60 (cM) Automated name-based View Maps
s_1BRU9X_1309 SNP 7.02 Quercus robur - Genetic_x3P_2015 - LG9 s_1BRU9X_1309 SNP 12.35 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1BRU9X_1309 SNP 6.70 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG9 s_1BRU9X_1309 SNP 9.55 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG9 s_1BRU9X_1309 SNP 5.14 (cM) Automated name-based View Maps
s_1AH9CD_1087 SNP 7.02 Quercus robur - Genetic_x11P1_2015 - LG9 s_1AH9CD_1087 SNP 9.55 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_1AH9CD_1087 SNP 6.70 (cM) Automated name-based View Maps
s_2FNHNV_656 SNP 6.14 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG9 s_2FNHNV_656 SNP 6.70 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG9 s_2FNHNV_656 SNP 9.55 (cM) Automated name-based View Maps

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