CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Quercus robur-Genetic_x11P2_2015  (Reference Set)
Min. Correspondence
Align Vertically
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Maps LG12
Start
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Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus robur - Genetic_x11P2_2015 [ View Map Set Info ]
Map Name: LG12
Map Start: 0.00 cM
Map Stop: 63.20 cM
Features by Type:
114 SNP
114 Total

Map Features

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Items 1 to 25 of 114.       of 5 | Next
Quercus robur - Genetic_x11P2_2015 - LG12
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
s_1A63EI_2068 SNP 0.00 Quercus robur - Genetic_x11P1_2015 - LG12 s_1A63EI_2068 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG12 s_1A63EI_2068 SNP 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1A63EI_2068 SNP 1.10 (cM) Automated name-based View Maps
s_1C3PSV_1041 SNP 2.63 Quercus robur - Genetic_A4_2015 - LG12 s_1C3PSV_1041 SNP 3.71 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1C3PSV_1041 SNP 3.70 (cM) Automated name-based View Maps
s_2HO1U2_202 SNP 2.63 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_2HO1U2_202 SNP 3.70 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG12 s_2HO1U2_202 SNP 3.71 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG12 s_2HO1U2_202 SNP 1.69 (cM) Automated name-based View Maps
s_1AUY7L_1085 SNP 3.51 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1AUY7L_1085 SNP 4.60 (cM) Automated name-based View Maps
s_1B6TS4_594 SNP 6.14 Quercus robur - Genetic_x11P1_2015 - LG12 s_1B6TS4_594 SNP 6.18 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1B6TS4_594 SNP 7.20 (cM) Automated name-based View Maps
s_1AVH7R_862 SNP 6.14 Quercus robur - Genetic_A4_2015 - LG12 s_1AVH7R_862 SNP 9.27 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1AVH7R_862 SNP 9.20 (cM) Automated name-based View Maps
s_1AXVCJ_853 SNP 6.14 Quercus robur - Genetic_x3P_2015 - LG12 s_1AXVCJ_853 SNP 8.03 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1AXVCJ_853 SNP 9.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG12 s_1AXVCJ_853 SNP 9.00 (cM) Automated name-based View Maps
s_1AEKGW_75 SNP 10.54 Quercus petraea - Genetic_Qs28f_2015 - LG12 s_1AEKGW_75 SNP 12.59 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1AEKGW_75 SNP 13.60 (cM) Automated name-based View Maps
s_1A6ZYA_766 SNP 12.30 Quercus robur - Genetic_x11P1_2015 - LG12 s_1A6ZYA_766 SNP 14.07 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1A6ZYA_766 SNP 14.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG12 s_1A6ZYA_766 SNP 14.21 (cM) Automated name-based View Maps
s_1BKGU7_1278 SNP 12.30 Quercus robur - Genetic_x11P1_2015 - LG12 s_1BKGU7_1278 SNP 14.63 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG12 s_1BKGU7_1278 SNP 8.86 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1BKGU7_1278 SNP 14.60 (cM) Automated name-based View Maps
s_1BIFV5_564 SNP 12.30 Quercus robur - Genetic_x11P1_2015 - LG12 s_1BIFV5_564 SNP 14.63 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG12 s_1BIFV5_564 SNP 16.68 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1BIFV5_564 SNP 15.30 (cM) Automated name-based View Maps
s_A4YYC_633 SNP 12.30 Quercus robur - Genetic_x11P1_2015 - LG12 s_A4YYC_633 SNP 14.63 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG12 s_A4YYC_633 SNP 16.68 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_A4YYC_633 SNP 15.30 (cM) Automated name-based View Maps
s_1B2XL2_302 SNP 12.30 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1B2XL2_302 SNP 15.30 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG12 s_1B2XL2_302 SNP 14.63 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG12 s_1B2XL2_302 SNP 16.68 (cM) Automated name-based View Maps
v_838_303 SNP 12.30 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 v_838_303 SNP 15.30 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG12 v_838_303 SNP 14.63 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG12 v_838_303 SNP 14.30 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG12 v_838_303 SNP 11.24 (cM) Automated name-based View Maps
s_1A5BAF_182 SNP 14.93 Quercus robur - Genetic_x3P_2015 - LG12 s_1A5BAF_182 SNP 14.52 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG12 s_1A5BAF_182 SNP 15.19 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1A5BAF_182 SNP 15.90 (cM) Automated name-based View Maps
s_1A1S4N_395 SNP 14.93 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1A1S4N_395 SNP 16.90 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG12 s_1A1S4N_395 SNP 15.73 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG12 s_1A1S4N_395 SNP 21.32 (cM) Automated name-based View Maps
s_1AVTVP_914 SNP 15.81 Quercus robur - Genetic_x3P_2015 - LG12 s_1AVTVP_914 SNP 16.06 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1AVTVP_914 SNP 17.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG12 s_1AVTVP_914 SNP 18.57 (cM) Automated name-based View Maps
s_2F2FOX_373 SNP 16.69 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_2F2FOX_373 SNP 17.40 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28f_2015 - LG12 s_2F2FOX_373 SNP 16.88 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG12 s_2F2FOX_373 SNP 16.06 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28m_2015 - LG12 s_2F2FOX_373 SNP 12.36 (cM) Automated name-based View Maps
v_5656_58 SNP 15.81 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 v_5656_58 SNP 17.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG12 v_5656_58 SNP 16.06 (cM) Automated name-based View Maps
s_1AK7E3_781 SNP 16.69 Quercus petraea - Genetic_Qs21_2015 - LG12 s_1AK7E3_781 SNP 12.86 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1AK7E3_781 SNP 17.50 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG12 s_1AK7E3_781 SNP 19.13 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG12 s_1AK7E3_781 SNP 21.93 (cM) Automated name-based View Maps
s_1AJ4L7_222 SNP 16.69 Quercus petraea - Genetic_Qs28f_2015 - LG12 s_1AJ4L7_222 SNP 18.31 (cM) Automated name-based View Maps
Quercus robur - Genetic_A4_2015 - LG12 s_1AJ4L7_222 SNP 22.55 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1AJ4L7_222 SNP 18.10 (cM) Automated name-based View Maps
s_1AJX8K_253 SNP 16.69 Quercus robur - Genetic_x11P1_2015 - LG12 s_1AJX8K_253 SNP 20.25 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1AJX8K_253 SNP 18.10 (cM) Automated name-based View Maps
s_AE01AI12F_94 SNP 16.69 Quercus robur - Genetic_x3P_2015 - LG12 s_AE01AI12F_94 SNP 17.30 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG12 s_AE01AI12F_94 SNP 14.87 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG12 s_AE01AI12F_94 SNP 21.94 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_AE01AI12F_94 SNP 19.20 (cM) Automated name-based View Maps
s_1BNT9D_690 SNP 16.69 Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1BNT9D_690 SNP 19.20 (cM) Automated name-based View Maps
Quercus robur - Genetic_x3P_2015 - LG12 s_1BNT9D_690 SNP 17.30 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG12 s_1BNT9D_690 SNP 21.94 (cM) Automated name-based View Maps
s_1DV7IM_229 SNP 19.32 Quercus robur - Genetic_A4_2015 - LG12 s_1DV7IM_229 SNP 25.02 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs21_2015 - LG12 s_1DV7IM_229 SNP 15.72 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_Quercus_composite_2015 - LG12 s_1DV7IM_229 SNP 20.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_x11P1_2015 - LG12 s_1DV7IM_229 SNP 23.06 (cM) Automated name-based View Maps

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