CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Quercus robur-Genetic_3PxA4_2007  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG4F
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
AFLP
gSSR
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus robur - Genetic_3PxA4_2007 [ View Map Set Info ]
Map Name: LG4F
Map Start: 0.00 cM
Map Stop: 115.48 cM
Features by Type:
1 gSSR
10 AFLP
11 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 11 of 11.
Quercus robur - Genetic_3PxA4_2007 - LG4F
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
*E-AAC/M-CTT-58/5 AFLP 0.00 Quercus robur - MultiQTL_3PxA4_2009_Debour - LG4F *E-AAC/M-CTT-58/5 AFLP 0.00 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG4F *E-AAC/M-CTT-58/5 AFLP 0.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG4F *E-AAC/M-CTT-58/5 AFLP 0.00 (cM) Automated name-based View Maps
*E-AAG/M-CTT-247/5 AFLP 11.58 No other positions
*E-AAC/M-CCT-182/5 AFLP 115.48 No other positions
*E-AAC/M-CAA-181 AFLP 15.70 Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG4F *E-AAC/M-CAA-181 AFLP 6.15 (cM) Automated name-based View Maps
*E-AAC/M-CAT-167/3 AFLP 25.43 Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG4F *E-AAC/M-CAT-167/3 AFLP 18.60 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG4F *E-AAC/M-CAT-167/3 AFLP 18.60 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG4F *E-AAC/M-CAT-167/3 AFLP 12.95 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG4F *E-AAC/M-CAT-167/3 AFLP 18.60 (cM) Automated name-based View Maps
*E-AAC/M-CAC-158 AFLP 32.52 No other positions
*P-CAG/M-CAA-93 AFLP 41.09 Quercus robur - MultiQTL_3PxA4_2009_Debour - LG4F *P-CAG/M-CAA-93 AFLP 30.70 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG4F *P-CAG/M-CAA-93 AFLP 30.70 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG4F *P-CAG/M-CAA-93 AFLP 23.38 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG4F *P-CAG/M-CAA-93 AFLP 30.70 (cM) Automated name-based View Maps
*P-CAG/M-AGC-212 AFLP 6.75 No other positions
*E-AAC/M-CCT-210/5 AFLP 63.37 Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG4F *E-AAC/M-CCT-210/5 AFLP 40.38 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG4F *E-AAC/M-CCT-210/5 AFLP 50.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG4F *E-AAC/M-CCT-210/5 AFLP 44.70 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG4F *E-AAC/M-CCT-210/5 AFLP 50.40 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG4F *E-AAC/M-CCT-210/5 AFLP 50.40 (cM) Automated name-based View Maps
*E-AAC/M-CCT-182/5 AFLP 80.32 No other positions
CQM4 gSSR 89.10 Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG4M CQM4 gSSR 41.76 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG4Mb CQM4 gSSR 13.80 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG4M CQM4 gSSR 57.30 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG4M CQM4 gSSR 57.20 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG4F CQM4 gSSR 71.20 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG4M CQM4 gSSR 57.30 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG4F CQM4 gSSR 71.20 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG4F CQM4 gSSR 71.20 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG4F CQM4 gSSR 71.20 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG4F CQM4 gSSR 71.20 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG4F CQM4 gSSR 55.84 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG4M CQM4 gSSR 57.30 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG4F CQM4 gSSR 71.20 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG4M CQM4 gSSR 57.30 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG4F CQM4 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG4F CQM4 gSSR 71.20 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG4Mb CQM4 gSSR 15.48 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG4M CQM4 gSSR 57.30 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG4F CQM4 gSSR 62.05 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG4M CQM4 gSSR 69.43 (cM) Automated name-based View Maps

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