CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus robur-Genetic_3PxA4_2007  (Reference Set)
Min. Correspondence
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Maps LG8M
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Magnification
Flipped



 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
AFLP
eSSR
EST
gSSR
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus robur - Genetic_3PxA4_2007 [ View Map Set Info ]
Map Name: LG8M
Map Start: 0.00 cM
Map Stop: 135.58 cM
Features by Type:
6 AFLP
4 EST
9 eSSR
3 gSSR
22 Total

Map Features

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Items 1 to 22 of 22.
Quercus robur - Genetic_3PxA4_2007 - LG8M
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
ZQR5a gSSR 72.67 Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG8F ZQR5a gSSR 42.02 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG8F ZQR5a gSSR 20.40 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG8 ZQR5a gSSR 18.10 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG8M ZQR5a gSSR 38.43 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG8M ZQR5a gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG8F ZQR5a gSSR 20.40 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG8M ZQR5a gSSR 58.10 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG8F ZQR5a gSSR 20.40 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG8M ZQR5a gSSR 21.92 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG8M ZQR5a gSSR 58.10 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG8 ZQR5a gSSR 33.47 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG8M ZQR5a gSSR 58.10 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG8M ZQR5a gSSR 17.16 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG8F ZQR5a gSSR 15.73 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG8F ZQR5a gSSR 59.98 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG8M ZQR5a gSSR 58.10 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG8M ZQR5a gSSR 60.52 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG8M ZQR5a gSSR 58.10 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG8F ZQR5a gSSR 20.40 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG8M ZQR5a gSSR 58.10 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG8F ZQR5a gSSR 20.40 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG8F ZQR5a gSSR 15.36 (cM) Automated name-based View Maps
*E-AAC/M-CAA-66/2 AFLP 0.00 Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG8M *E-AAC/M-CAA-66/2 AFLP 0.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG8M *E-AAC/M-CAA-66/2 AFLP 0.00 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG8M *E-AAC/M-CAA-66/2 AFLP 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG8M *E-AAC/M-CAA-66/2 AFLP 12.39 (cM) Automated name-based View Maps
*P-CCA/M-ATA-190/1 AFLP 100.88 No other positions
*E-AAG/M-CAC-174/4 AFLP 12.74 Quercus robur - MultiQTL_3PxA4_2009_Debour - LG8M *E-AAG/M-CAC-174/4 AFLP 11.60 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG8M *E-AAG/M-CAC-174/4 AFLP 11.60 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG8M *E-AAG/M-CAC-174/4 AFLP 11.60 (cM) Automated name-based View Maps
*E-AAG/M-CTT-412/5 AFLP 37.02 Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG8M *E-AAG/M-CTT-412/5 AFLP 41.02 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG8M *E-AAG/M-CTT-412/5 AFLP 31.60 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG8M *E-AAG/M-CTT-412/5 AFLP 31.60 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG8M *E-AAG/M-CTT-412/5 AFLP 31.60 (cM) Automated name-based View Maps
*E-AAG/M-CTT-46/4 AFLP 48.26 Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG8M *E-AAG/M-CTT-46/4 AFLP 48.73 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG8M *E-AAG/M-CTT-46/4 AFLP 41.60 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG8M *E-AAG/M-CTT-46/4 AFLP 41.60 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG8M *E-AAG/M-CTT-46/4 AFLP 41.60 (cM) Automated name-based View Maps
*E-AAG/M-CTT-195/4 AFLP 87.04 Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG8M *E-AAG/M-CTT-195/4 AFLP 69.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG8M *E-AAG/M-CTT-195/4 AFLP 69.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG8M *E-AAG/M-CTT-195/4 AFLP 69.01 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG8M *E-AAG/M-CTT-195/4 AFLP 69.00 (cM) Automated name-based View Maps
FIR044 eSSR 12.74 No other positions
PIE090 eSSR 12.74 No other positions
PIE204 eSSR 37.02 No other positions
PIE054 eSSR 37.02 Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG8F PIE054 eSSR 58.24 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG8M PIE054 eSSR 36.64 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG8M PIE054 eSSR 36.64 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG8F PIE054 eSSR 58.24 (cM) Automated name-based View Maps
PIE262 eSSR 37.02 Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG8F PIE262 eSSR 53.92 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG8M PIE262 eSSR 28.74 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG8F PIE262 eSSR 53.92 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG8M PIE262 eSSR 28.74 (cM) Automated name-based View Maps
FIR081 eSSR 72.67 No other positions
FIR052 eSSR 72.67 No other positions
GOT022 eSSR 72.67 Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG8M GOT022 eSSR 68.47 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG8M GOT022 eSSR 68.47 (cM) Automated name-based View Maps
WAG021 eSSR 72.67 No other positions
PAL1 EST 12.74 No other positions
CHZFP EST 12.74 No other positions
CL16 EST 12.74 Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG8M CL16 EST 0.00 (cM) Automated name-based View Maps
C2H4resp EST 72.67 Quercus robur - Genetic_3PxA4_2007 - LG8F C2H4resp EST 15.73 (cM) Automated name-based View Maps
PQRu5 gSSR 37.02 Castanea sativa - Genetic_BursaxHoppa_2009 - LG7F PQRu5 gSSR 6.96 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG7M PQRu5 gSSR 5.25 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG8M PQRu5 gSSR 52.78 (cM) Automated name-based View Maps
ZQP110 gSSR 135.58 Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG8F ZQP110 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG8M ZQP110 gSSR 94.80 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG8 ZQP110 gSSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG8F ZQP110 gSSR 7.57 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG8M ZQP110 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG8F ZQP110 gSSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG8F ZQP110 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG8M ZQP110 gSSR 94.80 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG8F ZQP110 gSSR 39.69 (cM) Automated name-based View Maps
Castanea sativa - QTL_BursaxHoppa_2009_Bud_pheno - LG7F ZQP110 gSSR 52.70 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG8F ZQP110 gSSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG8Ma ZQP110 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG8F ZQP110 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG8F ZQP110 gSSR 11.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG8M ZQP110 gSSR 94.80 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG8 ZQP110 gSSR 18.94 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG8M ZQP110 gSSR 5.58 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG8M ZQP110 gSSR 86.47 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG8M ZQP110 gSSR 94.80 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG8F ZQP110 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG8M ZQP110 gSSR 77.29 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG8F ZQP110 gSSR 6.58 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG8F ZQP110 gSSR 47.57 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG8F ZQP110 gSSR 48.04 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG7F ZQP110 gSSR 36.71 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG8F ZQP110 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG8M ZQP110 gSSR 94.80 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG8M ZQP110 gSSR 94.80 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG8M ZQP110 gSSR 77.29 (cM) Automated name-based View Maps

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