CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus robur-Genetic_3PxA4_2007  (Reference Set)
Min. Correspondence
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Maps LG11M
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Magnification
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 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
AFLP
eSSR
EST
gSSR
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus robur - Genetic_3PxA4_2007 [ View Map Set Info ]
Map Name: LG11M
Map Start: 0.00 cM
Map Stop: 90.89 cM
Features by Type:
7 AFLP
1 EST
8 eSSR
4 gSSR
20 Total

Map Features

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Items 1 to 20 of 20.
Quercus robur - Genetic_3PxA4_2007 - LG11M
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
ZQR111 gSSR 33.43 Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG1M ZQR111 gSSR 13.59 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG11F ZQR111 gSSR 17.70 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG11Fa ZQR111 gSSR 16.03 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG11M ZQR111 gSSR 57.90 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG11Mb ZQR111 gSSR 7.30 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG11M ZQR111 gSSR 57.90 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG11M ZQR111 gSSR 57.90 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG11F ZQR111 gSSR 17.70 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG11M ZQR111 gSSR 57.90 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG11F ZQR111 gSSR 17.70 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG11F ZQR111 gSSR 18.05 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG11F ZQR111 gSSR 17.70 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG11 ZQR111 gSSR 49.12 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG11M ZQR111 gSSR 40.45 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG11F ZQR111 gSSR 17.70 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG11M ZQR111 gSSR 57.90 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG11M ZQR111 gSSR 23.77 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG11F ZQR111 gSSR 16.94 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG11F ZQR111 gSSR 17.70 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG11M ZQR111 gSSR 57.90 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG11F ZQR111 gSSR 20.33 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG11F ZQR111 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Croissance - LG11F ZQR111 gSSR 17.70 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG11F ZQR111 gSSR 17.70 (cM) Automated name-based View Maps
ZQR4 gSSR 79.94 Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG11F ZQR4 gSSR 61.89 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG11F ZQR4 gSSR 41.23 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG11Ma ZQR4 gSSR 0.43 (cM) Automated name-based View Maps
ZQR59 gSSR 25.61 Quercus robur - MultiQTL_3PxA4_2009_Debour - LG2F ZQR59 gSSR 79.30 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph1 - LG2F ZQR59 gSSR 77.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG2F ZQR59 gSSR 79.30 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG2F ZQR59 gSSR 42.27 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG2F ZQR59 gSSR 79.20 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG2F ZQR59 gSSR 79.30 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG2F ZQR59 gSSR 79.30 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG2F ZQR59 gSSR 76.21 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG2F ZQR59 gSSR 79.30 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG2F ZQR59 gSSR 79.30 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph2 - LG2F ZQR59 gSSR 77.00 (cM) Automated name-based View Maps
*P-CAG/M-AGC-152/4 AFLP 0.00 Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG11M *P-CAG/M-AGC-152/4 AFLP 87.10 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG11M *P-CAG/M-AGC-152/4 AFLP 87.10 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG11M *P-CAG/M-AGC-152/4 AFLP 0.00 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG11M *P-CAG/M-AGC-152/4 AFLP 87.10 (cM) Automated name-based View Maps
*E-AAG/M-CTA-256/5 AFLP 25.61 Quercus robur - MultiQTL_3PxA4_2009_Debour - LG11M *E-AAG/M-CTA-256/5 AFLP 65.50 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG11M *E-AAG/M-CTA-256/5 AFLP 65.50 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG11M *E-AAG/M-CTA-256/5 AFLP 17.71 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG11M *E-AAG/M-CTA-256/5 AFLP 65.50 (cM) Automated name-based View Maps
*E-AAC/M-CAA-82/4 AFLP 33.43 No other positions
*E-AAC/M-CAT-190/2 AFLP 33.43 No other positions
*E-AAC/M-CCT-175/5 AFLP 40.07 Quercus robur - MultiQTL_3PxA4_2009_Debour - LG11M *E-AAC/M-CCT-175/5 AFLP 51.60 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG11M *E-AAC/M-CCT-175/5 AFLP 51.60 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG11M *E-AAC/M-CCT-175/5 AFLP 29.24 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG11M *E-AAC/M-CCT-175/5 AFLP 51.60 (cM) Automated name-based View Maps
*E-AAG/M-CTA-207 AFLP 58.83 No other positions
*E-AAC/M-CAT-200 AFLP 58.83 Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG11M *E-AAC/M-CAT-200 AFLP 37.12 (cM) Automated name-based View Maps
PIE144 eSSR 25.61 Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG11M PIE144 eSSR 94.84 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG11M PIE144 eSSR 94.84 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG11F PIE144 eSSR 20.33 (cM) Automated name-based View Maps
PIE275 eSSR 33.43 Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG11M PIE275 eSSR 79.63 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG11F PIE275 eSSR 20.33 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG11F PIE275 eSSR 78.73 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG11M PIE275 eSSR 79.63 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG11F PIE275 eSSR 78.73 (cM) Automated name-based View Maps
PIE202 eSSR 33.43 Quercus robur - Genetic_3PxA4_2007 - LG11F PIE202 eSSR 20.33 (cM) Automated name-based View Maps
FIR031 eSSR 33.43 Quercus robur - Genetic_3PxA4_2007 - LG11F FIR031 eSSR 20.33 (cM) Automated name-based View Maps
PIE033 eSSR 79.94 Quercus robur - Genetic_3PxA4_2007 - LG11F PIE033 eSSR 98.38 (cM) Automated name-based View Maps
PIE022 eSSR 79.94 Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG3M PIE022 eSSR 3.01 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG3M PIE022 eSSR 3.01 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG3F PIE022 eSSR 16.35 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG3F PIE022 eSSR 16.35 (cM) Automated name-based View Maps
PIE257 eSSR 79.94 Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG11F PIE257 eSSR 79.03 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG11F PIE257 eSSR 79.03 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG11M PIE257 eSSR 79.37 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG11M PIE257 eSSR 79.37 (cM) Automated name-based View Maps
PIE102 eSSR 90.89 Quercus robur - Genetic_3PxA4_2007 - LG11F PIE102 eSSR 84.90 (cM) Automated name-based View Maps
S08D11 EST 40.07 Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG11M S08D11 EST 33.78 (cM) Automated name-based View Maps
ZQR18 gSSR 90.89 Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG11M ZQR18 gSSR 4.78 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG11 ZQR18 gSSR 6.61 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG11Mb ZQR18 gSSR 8.26 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG11Fb ZQR18 gSSR 8.14 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG11Fa ZQR18 gSSR 8.49 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG11b ZQR18 gSSR 11.32 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG11F ZQR18 gSSR 41.06 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG11F ZQR18 gSSR 9.36 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG11Fb ZQR18 gSSR 25.89 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG11M ZQR18 gSSR 68.71 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG11Ma ZQR18 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG11F ZQR18 gSSR 119.75 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG11F ZQR18 gSSR 9.50 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG11M ZQR18 gSSR 4.78 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG11F ZQR18 gSSR 9.50 (cM) Automated name-based View Maps

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